Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021330579.1 | Gene: | cacna1c / 170581 | ZFINID: | ZDB-GENE-020129-1 | Length: | 2202 | Species: | Danio rerio |
Alignment Length: | 3244 | Identity: | 613/3244 - (18%) |
---|---|---|---|
Similarity: | 960/3244 - (29%) | Gaps: | 1563/3244 - (48%) |
- Green bases have known domain annotations that are detailed below.
Fly 184 RHERRDRRDEQQAARRRTGRRHSGASSLSDAAAATAAGRSRSRGGGRTGGAVSSSTGSSCNGSCS 248
Fly 249 SDDGDSSHTSSSSSSSSSGEPNLPYPGFP---------------------EISIRALTQ-----Y 287
Fly 288 TRPRN-------------WCLMLITNP----------W--FERVSILVILLNCITLGMYQPC-VD 326
Fly 327 DACVTNRCKILQIFDDIIFAFFALEMTIKMVAMG-ICGKNTYLADSWNRLDFFIVLAGLLEYVMH 390
Fly 391 --------------VENLNLTAIRTIRVLRPLRAINRIPSMRILVMLLLDTLPMLGNVLLLCFFV 441
Fly 442 FFIFGIIGVQLWEGILRQRCSLMRT--EGMVYPLTVPEVYRVRVRVNSLSQYYEFSKDQDYICST 504
Fly 505 PNDSGMHLCGNFPPYRIGSLVCNEEAKLFDFNEPTNTSCVNWNQYYTTCKQSGENPFQGTISFDN 569
Fly 570 IGMAWVAIFLVISLEGWTDIMYYVQDAHSF-WDWIYFVLLIVIGSFFMINLCLVVIATQFSETKK 633
Fly 634 REMERMRQERARYTSTSTLASSTNNSEPATCYAEIVKYIAHLWRRFKRRMLKKYRLYKYQRQQRK 698
Fly 699 EGLLPNADNLTFSPSRIKCHHPKCPKYSNRKPSSIQDQMITVMVPLNSASNNINNNNNNNSNSSN 763
Fly 764 HNGSGNHTAAGGGNNNNNNNNNNAASCTTVALVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQN 828
Fly 829 QQQQQQQQQHSSSDNTEQSLAPDGLPRSSSLKKSTAHHQLKPEGSAAEQKTILLKFPQQMIDSEQ 893
Fly 894 LILQLGNLGKSHPCTSGFLSPPTSASRRPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATV 958
Fly 959 AGTAAAAAAAAATGSGSGNNNHQNGGASGGAGTGGTTEKSNIFSTEKMTQAGDGSIWQVNLPQTI 1023
Fly 1024 GTIANPYADCSELGIHDAMTCQELLAFSVAFSAALPTGQSTLESFYTSLARCDPHTAEALRAHHK 1088
Fly 1089 PRSVPTGQNQTTPGAEGATVMVASTAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHH 1153
Fly 1154 HNNNNTTSHSRNYRSRQGQGNSRMREPRAPTGNYMEDYACCYDLYQNALSPLDERPRQRSPTTRC 1218
Fly 1219 LISVY-RCMSRVCSWIRRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETSNVV 1282
Fly 1283 FSGIFAVEMLLKVVAEGPFRYIANGFNVFDGIIV---ILSAIEICQTFMGNGTGGGGSGLSVLRT 1344
Fly 1345 FRLLRILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGGKFCKFLDESGL 1409
Fly 1410 ERECTCPEIISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGM------EKTSHWAAL 1468
Fly 1469 YFVALMTFGNYVLFNLLVAILVEGF-------SSERNERREREQRELVKKLREETLAENYSDGMY 1526
Fly 1527 DESRSEADSSTTNDSYYEVRNRWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPA 1591
Fly 1592 SSAAPSASGTSGASAPGDRERDRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTY 1656
Fly 1657 SIKERRSEAPRLSKIRLARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPP 1721
Fly 1722 NIFTGGQRSLDEGIPSIDLIPPSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSMHSVIIDDI 1786
Fly 1787 SKSSSSTAAATPIYVPTISSTADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGSSSS 1851
Fly 1852 ERLPLAPPPQQGSFKQRLRRGSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNGG 1916
Fly 1917 DNSCLLRNSNAVVSGSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNLN 1981
Fly 1982 QPPKLRPGSGQRRMSSIELAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDNML 2046
Fly 2047 QQYMEARDKRKNSISHYNLKKRLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRLSK 2111
Fly 2112 DQQQLAMQPHSMVPGGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDNRFRQICTWFVNQKW 2176
Fly 2177 FDNVVLLFIALNCITLAMERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYF 2241
Fly 2242 TSGWNIMDGSLVTISIIDLLMSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLS 2306
Fly 2307 SLRPIGNIVLICCTFFIIFGILGVQLFKGTFYYCEGENIKGVRNADECRRI-----PGNV----- 2361
Fly 2362 ----WTNRKYNFDDLGKALMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFIL 2422
Fly 2423 LVGFFVLNMFVGVVVENFHRCREEQ----EKEEKIRRAAKRALQMEKKRRRMHEPPYYTNYSPTR 2483
Fly 2484 MFVHNVVTSKYFDLAIAAVIGLNVVTMAMEYYKMPSGLKYALKIFNYFFTAVFILEANMKLVALG 2548
Fly 2549 WKLYLKDRWNQLDVGIVLLSIVGIVLEELE------------------TNTHQIIPINPTIIRVM 2595
Fly 2596 RVLRIARVLKLLKMANGIRALLDTVM---QALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDE 2657
Fly 2658 IPCQGLGEHAHFANFGMAFLTLFRVATGDNWNGIMKDTLRDNCDDAADCVRNCCVS-------SV 2715
Fly 2716 IAPIFFVIFVLMAQFVLVNVVVAVLM---------------KHLEESHKQMEDELDME------- 2758
Fly 2759 ---VELERELVREQEFAQEQKLCQQLAEAQSKAAAPPRPL-------------AKVKSLPKNFIY 2807
Fly 2808 STPSLDKKFPAVSGVNNPSLTSSAATNLNQVATAGSGGAAPGAVPAGSGAGPRRQTV-------- 2864
Fly 2865 --QYFQQ-------------PPQSMLGGLSLAEMGGTLTPQALGARLGEPFGGGGGNKSGPRRQS 2914
Fly 2915 YWQINPIRKRGVLSKERSLDEQAIRRRNLEAKRTSCDSLPWGGDALDCRRGTIFESLESDGGGVG 2979
Fly 2980 GGGSGGGGGGLGGGVSYDLRSVRSADVGHSEMDGDVSLSVVSALVPSVTTPLP------------ 3032
Fly 3033 -PPLSLPIVTPTSTP-----------------TPLQLPMPMPM----------PMAHPPPRRPFG 3069
Fly 3070 WSQSVDQGC-----LRSNLLLSVPRSMP-PRSRSGSTKQLFKQQALDEDADMDENSLLLPTAAGG 3128
Fly 3129 GSGPGSVAVIASSSLDLPDQSGSSKQILPDIALGVSKSDSSDILRIISERRRMDQREQR 3187 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 87/321 (27%) |
Ion_trans | 1261..1495 | CDD:278921 | 86/249 (35%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 100/273 (37%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 76/245 (31%) | ||
cacna1c | XP_021330579.1 | Ion_trans | 156..452 | CDD:306908 | 100/356 (28%) |
Ion_trans | 559..798 | CDD:306908 | 90/266 (34%) | ||
Ion_trans | 934..1211 | CDD:306908 | 107/286 (37%) | ||
Ion_trans | 1253..1527 | CDD:306908 | 88/287 (31%) | ||
GPHH | 1528..1598 | CDD:318993 | 17/74 (23%) | ||
Ca_chan_IQ | 1600..1671 | CDD:312334 | 15/87 (17%) | ||
CAC1F_C | 1694..2129 | CDD:318975 | 64/349 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |