Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012826731.2 | Gene: | scn1a / 100488621 | XenbaseID: | XB-GENE-978019 | Length: | 2020 | Species: | Xenopus tropicalis |
Alignment Length: | 2610 | Identity: | 544/2610 - (20%) |
---|---|---|---|
Similarity: | 933/2610 - (35%) | Gaps: | 968/2610 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 284 LTQYTRPRNWCLMLITNPWFERVSILVILLNCITLGMYQPCVDDACVTNRCKILQIFDDIIFAF- 347
Fly 348 --FALEMTIKMVAMGIC-GKNTYLADSWNRLDFFIVLAGLLEYVMHVENL-NLTAIRTIRVLRPL 408
Fly 409 RAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRCSLMRTEGMVYP- 472
Fly 473 ------LTVPEVYRVRVRV--------NSLSQYYEFSKDQDYICSTPNDSGMHLCGNFPPYRIGS 523
Fly 524 LVCNEEAKLFDFNEPTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTD 588
Fly 589 IMYYVQDAHSFWDWIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERARYTSTSTLA 653
Fly 654 SSTNNSEPATCYAEIVKYIAHLWRRFKRRMLKKYRLYKYQRQQRKEGLLPNADNLTFSPSRIKCH 718
Fly 719 HPKCPKYSNRKPSSIQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAAGGGNNNNNNN 783
Fly 784 NNNAASCTTVALVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQHSSSDNTEQSL 848
Fly 849 APDGLPRSSSLKKSTAHHQLKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGKSHPCTSGFLS 913
Fly 914 PPTSASRRPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAAAATGSGSGN- 977
Fly 978 ----------NNHQNGGASGGAGTGGTTEKSNIFSTEKMTQAGDGSIWQVNLPQTIGTIANPYAD 1032
Fly 1033 CSELGIHDAMTCQELLAFSVAFSAALPTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVPTGQN 1097
Fly 1098 QTTPGAEGATVMVASTAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNNTTSH 1162
Fly 1163 SRNYRSRQGQGNSRMREPRAPTGNYMEDYACCYDLYQNALSPLDERPRQRSPTT----------- 1216
Fly 1217 -----RCLISVYRCMSRVCSW--------IRRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQ 1268
Fly 1269 PPELTAIVETSNVVFSGIFAVEMLLKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMGNGTG 1333
Fly 1334 GGGSGLSVLRTFRLLRILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGG 1398
Fly 1399 KFCKFLDESGLERECTCPEIISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGMEKTS 1463
Fly 1464 H-WAALYFVALMTFGNYVLFNLLVAILVEGFSSERNERREREQRELVKKLREETLAENYSDGMYD 1527
Fly 1528 ESRSEADSSTTNDSYYEVRNRWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPAS 1592
Fly 1593 SAAPSASGTSGASAPGDRERDRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTYS 1657
Fly 1658 IKERRSEAPRLSKIRLARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPN 1722
Fly 1723 IFTGGQRSLDEGIPSIDL--IPPSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSMHSVIIDD 1785
Fly 1786 ISKSSSSTAAATPIYVPTISSTADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGSSS 1850
Fly 1851 SERLPLAPPPQQGSFKQRLRRGSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNG 1915
Fly 1916 GDNSCLLRNSNAVVSGSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNL 1980
Fly 1981 NQPP-KLRPGSGQRRMSSIELAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDN 2044
Fly 2045 MLQQYMEARDKRKNSISHYNLKKRLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRL 2109
Fly 2110 SKDQQQLAMQPHSMVPGGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDNR------FRQIC 2168
Fly 2169 TWFVNQKWFDNVVLLFIALNCITLAMERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGM 2233
Fly 2234 FYGHDAYFTSGWNIMDGSLVTISIIDLLMSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLK 2298
Fly 2299 LVVQTLLSSLRPIGNIVLICCTFFIIFGILGVQLFKGTFYYC----EGENI--KGVRNADECRRI 2357
Fly 2358 PGNV-WTNRKYNFDDLGKALMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFI 2421
Fly 2422 LLVGFFVLNMFVGVVVENFHRCREE--------QEKEEKIRRAAKRALQMEKKRRRMHEPPYYTN 2478
Fly 2479 YSPTRMFVHNVVTSKYFDLAIAAVIGLNVVTMAMEYYKMPSGLKYALKIFNYFFTAVFILEANMK 2543
Fly 2544 LVALGWKLYLKDRWNQLDVGIVLLSIVGIVLEELETNTHQIIPINPTIIRVMRVLRIARVLKLLK 2608
Fly 2609 MANGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFANFG 2673
Fly 2674 MAFLTLFRVATGDNWNGIMKDTLRDNCDDAADC----------VRNCCVSSVIAPIFFVIFVLMA 2728
Fly 2729 QFVLVNVVVAVLMKHL----EESHKQM-EDELDMEVEL-ERELVREQEFAQEQKLCQQLAEAQSK 2787
Fly 2788 AAAPPRPLAK 2797 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 87/323 (27%) |
Ion_trans | 1261..1495 | CDD:278921 | 77/234 (33%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 93/270 (34%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 69/227 (30%) | ||
scn1a | XP_012826731.2 | Ion_trans | 128..435 | CDD:395416 | 94/354 (27%) |
Na_trans_cytopl | 515..723 | CDD:403218 | 53/392 (14%) | ||
Ion_trans | 772..985 | CDD:395416 | 74/235 (31%) | ||
Na_trans_assoc | 1011..1222 | CDD:399489 | 76/636 (12%) | ||
Ion_trans | 1226..1498 | CDD:395416 | 97/278 (35%) | ||
Na_channel_gate | 1490..1542 | CDD:240441 | 11/57 (19%) | ||
Ion_trans | 1547..1802 | CDD:395416 | 83/267 (31%) | ||
GPHH | 1814..1861 | CDD:407139 | 11/41 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |