Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031749252.1 | Gene: | scn2a / 100486750 | XenbaseID: | XB-GENE-6447552 | Length: | 1970 | Species: | Xenopus tropicalis |
Alignment Length: | 2585 | Identity: | 536/2585 - (20%) |
---|---|---|---|
Similarity: | 922/2585 - (35%) | Gaps: | 963/2585 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 284 LTQYTRPRNWCLMLITNPWFERVSILVILLNCITLGMYQPCVDDACVTNRCKILQIFDDIIFAF- 347
Fly 348 --FALEMTIKMVAMGIC-GKNTYLADSWNRLDFFIVLAGLLEYVMHVENL-NLTAIRTIRVLRPL 408
Fly 409 RAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRCSLMRTEGMVYPL 473
Fly 474 TVPEVYRVRVRVN-----SLSQYYEFSKDQD-YICSTPNDSGMHLCGNFPPYRIGSLVCNEEAKL 532
Fly 533 FDFNEPTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMYYVQDAH 597
Fly 598 SFWDWIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERARYTSTSTLASSTNNSEPA 662
Fly 663 TCYAEIVKYIAHLWRRFKRRMLKKYRLYKYQRQQRKEGLLPNADNLTFSPSRIKCHHPKCPKYSN 727
Fly 728 RKPSSIQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAAGGGNNNNNNNNNNAASCTT 792
Fly 793 VALVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQHSSSDNTEQSLAPDGL---- 853
Fly 854 --PRSSSLKKSTAHHQ--LKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGKSHPCTSGFLSP 914
Fly 915 PTSASRRPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAAAATGSGSGNNN 979
Fly 980 HQNGGASGGAGTGGTTEKSNIFSTEKMTQAGDGSIWQVNLPQTIGTIANPYADCSELGIHDAMTC 1044
Fly 1045 QELLAFSVAFSAALPTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVPTGQNQTTPGAEGATVM 1109
Fly 1110 VASTAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNNTTSHSRNYRSRQGQGN 1174
Fly 1175 SRMREPRAPTGNYMEDYACCYDLYQ----------------NALSPLDERPRQRSPT-----TRC 1218
Fly 1219 LISVYRCMSRVCSW--IRRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETSNV 1281
Fly 1282 VFSGIFAVEMLLKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMGNGTGGGGSGLSVLRTFR 1346
Fly 1347 LLRILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGGKFCKFLDESGLER 1411
Fly 1412 ECTCPEIISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGMEKTSH-WAALYFVALMT 1475
Fly 1476 FGNYVLFNLLVAILVEGFSSERNERREREQRELVKKLREETLAENYSDGMYDESRSEADSSTTND 1540
Fly 1541 SYYEVRNRWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPASSAAPSASGTSGAS 1605
Fly 1606 APGDRERDRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTYSIKERRSEAPRLSK 1670
Fly 1671 IRLARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPNIFTGGQRSLDEGI 1735
Fly 1736 PSIDLIPPSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSMHSVIIDDISKSSSSTAAATPIY 1800
Fly 1801 VPTISSTADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGSSSSERLPLAPPPQQGSF 1865
Fly 1866 KQRLRRGSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNGGDNSCLLRNSNAVVS 1930
Fly 1931 GSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNLNQPPKLRPGSGQRRM 1995
Fly 1996 SSIELAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDNMLQQYMEARDKRKNSI 2060
Fly 2061 SHYNLKKRLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRLSKDQQQLAMQPHSMVP 2125
Fly 2126 GGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDNRFRQICTWFVNQKWFDNVVLLFIALNCI 2190
Fly 2191 TLAMERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYFTSGWNIMDGSLVTI 2255
Fly 2256 SIIDLLMSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLICCT 2320
Fly 2321 FFIIFGILGVQLFKGTFYYCEGEN------IKGVRNADECRRIPGNV----WTNRKYNFDDLGKA 2375
Fly 2376 LMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVGVVVENF 2440
Fly 2441 HRCREE--------QEKEEKIRRAAKRALQMEKKRRRMHEPPYYTNYSPTRMFVHNVVTSKYFDL 2497
Fly 2498 AIAAVIGLNVVTMAMEYYKMPSGLKYALKIFNYFFTAVFILEANMKLVALGWKLYLKDRWNQLDV 2562
Fly 2563 GIVLLSIVGIVLEELETNTHQIIPINPTIIRVMRVLRIARVLKLLKMANGIRALLDTVMQALPQV 2627
Fly 2628 GNLGLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLTLFRVATGDNWNGIM 2692
Fly 2693 KDTLRD---NCDDAAD----CVRNCCVSSVIAPIFFVIFVLMAQFVLVNVVVAVLMKHL----EE 2746
Fly 2747 SHKQM-EDELDMEVEL-ERELVREQEFAQEQKLCQQLAEAQSKAAAPPRP 2794 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 86/314 (27%) |
Ion_trans | 1261..1495 | CDD:278921 | 79/234 (34%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 92/273 (34%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 68/224 (30%) | ||
scn2a | XP_031749252.1 | Ion_trans | 127..408 | CDD:395416 | 92/345 (27%) |
Na_trans_cytopl | 488..678 | CDD:403218 | 54/390 (14%) | ||
Ion_trans | 727..940 | CDD:395416 | 75/235 (32%) | ||
Na_trans_assoc | 966..1175 | CDD:399489 | 66/629 (10%) | ||
Ion_trans | 1179..1454 | CDD:395416 | 96/281 (34%) | ||
Na_channel_gate | 1446..1498 | CDD:240441 | 9/57 (16%) | ||
Ion_trans | 1503..1758 | CDD:395416 | 81/264 (31%) | ||
GPHH | 1770..1817 | CDD:407139 | 9/38 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |