Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031760488.1 | Gene: | scn5a / 100485924 | XenbaseID: | XB-GENE-6037407 | Length: | 1989 | Species: | Xenopus tropicalis |
Alignment Length: | 2621 | Identity: | 546/2621 - (20%) |
---|---|---|---|
Similarity: | 916/2621 - (34%) | Gaps: | 1010/2621 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 291 RNWCLMLITNPWFERVSILVILLNCITLGMYQPCVDDACVTNRCKILQIFDDIIFAFFALEMTIK 355
Fly 356 MVAMGICGKN-TYLADSWNRLDF-FIVLAGLLEYVMHVENLNLTAIRTIRVLRPLRAINRIPSMR 418
Fly 419 ILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRCSLMRTEGMVYPLTVPEV-YRVR 482
Fly 483 VRVNSL--------SQYYEFSKDQDYICSTPNDSGMHLCGNFPPYRIGSLVCNEEAKLFD-FNEP 538
Fly 539 TNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMYYVQDAHSFWDWI 603
Fly 604 YFVLLIVIGSFFMINLCLVVIATQF----------SETKKRE----MERMRQERARYTSTSTLAS 654
Fly 655 STNNSEPATCYAEIVKYIAHLWRRFKRRMLKKYRLYKY------------QRQQRKEGLLPNADN 707
Fly 708 LTFSPSRIKCHHPKCPKYSNRKPSSIQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTA 772
Fly 773 AGGGNNNNNNNNNNAASCTTVALVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQ 837
Fly 838 HSSSDNTEQSLAPDGLPRSSSLKKSTAHHQLKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLG 902
Fly 903 KSHPCTSGFLSPPTSASRRPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAA 967
Fly 968 AAATGSGSGNNNHQNGGASGGAGTGGTTEKSNIFSTEKMTQAGDGSIWQVNLPQTIGTIANPYAD 1032
Fly 1033 CSELGIHDAMTCQELLAFSVAFSAALPTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVPTGQN 1097
Fly 1098 QTTPGAEGATVMVASTAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNNTTSH 1162
Fly 1163 SRNYRSRQGQGNSRMREPRAPTGNYMEDYACCYDLYQNALSPLDERPRQRSPTTRC------LIS 1221
Fly 1222 VYRCMSRVCS-W--IRRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETSNVVF 1283
Fly 1284 SGIFAVEMLLKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMGNGTGGGGSGLSVLRTFRLL 1348
Fly 1349 RILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGGKFCKFLDESGLEREC 1413
Fly 1414 TCPEIISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGMEKTSH-WAALYFVALMTFG 1477
Fly 1478 NYVLFNLLVAILVEGFSSERNERREREQRELVKKLREETLAENYSDGMYDESRSEADSSTTNDSY 1542
Fly 1543 YEVRNRWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPASSAAPSASGTSGASAP 1607
Fly 1608 GDRERDRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTYSIKERRSEAPRLSKIR 1672
Fly 1673 LARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPNIFTGGQRSLDEGIPS 1737
Fly 1738 IDLIPPSPVLSHKPLNILNASQLGVGMGGGVPSTAGSSSSMHSVIIDDISKSSSSTAAATPIYVP 1802
Fly 1803 TISSTADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGSSSSERLPLAPPPQQGSFKQ 1867
Fly 1868 RLRRGSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNGGDNSCLLRNSNAVVSGS 1932
Fly 1933 SSGTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNLNQPPKLRPGSGQRRMSS 1997
Fly 1998 IELAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDNMLQQYMEARDKRKNSISH 2062
Fly 2063 YNLKKRLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRLSKDQQQLAMQPH------ 2121
Fly 2122 -------SMVPGGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDNRFRQICTWFVNQKWFDN 2179
Fly 2180 VVLLFIALNCITLAMERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYFTSG 2244
Fly 2245 WNIMDGSLVTISIIDLLMSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLR 2309
Fly 2310 PIGNIVLICCTFFIIFGILGVQLFKGTFYYCEGENIK------GVRNADECRRIPGN--VWTNRK 2366
Fly 2367 YNFDDLGKALMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNM 2431
Fly 2432 FVGVVVENFHRCREE--------QEKEEKIRRAAKRALQMEKKRRRMHEPPYYTNYSPTRMFVHN 2488
Fly 2489 VVTSKYFDLAIAAVIGLNVVTMAMEYYKMPSGLKYALKIFNYFFTAVFILEANMKLVALGWKLYL 2553
Fly 2554 KDRWNQLDVGIVLLSIVGIVLEELETNTHQIIPINPTIIRVMRVLRIARVLKLLKMANGIRALLD 2618
Fly 2619 TVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLTLFRVA 2683
Fly 2684 TGDNWNGIMKDTLRD---NCD-DAAD----CVRNCCVSSVIAPIFFVIFVLMAQFVLVNVVVAVL 2740
Fly 2741 MKHL----EESHKQM-EDELDMEVELERELVREQEFAQEQKLCQQLAEAQSKAAAPPRPLAKVKS 2800
Fly 2801 LPKNFIYSTPSLDKKFPAVSG 2821 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 92/329 (28%) |
Ion_trans | 1261..1495 | CDD:278921 | 78/234 (33%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 94/271 (35%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 74/225 (33%) | ||
scn5a | XP_031760488.1 | Ion_trans | 129..424 | CDD:395416 | 94/346 (27%) |
Na_trans_cytopl | 485..675 | CDD:403218 | 59/485 (12%) | ||
Ion_trans | 724..937 | CDD:395416 | 75/235 (32%) | ||
Na_trans_assoc | 963..1176 | CDD:399489 | 59/599 (10%) | ||
Ion_trans | 1180..1453 | CDD:395416 | 98/279 (35%) | ||
Na_channel_gate | 1445..1497 | CDD:240441 | 11/57 (19%) | ||
Ion_trans | 1502..1757 | CDD:395416 | 86/265 (32%) | ||
GPHH | 1769..1816 | CDD:407139 | 8/58 (14%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |