Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031752682.1 | Gene: | cacna1s / 100485035 | XenbaseID: | XB-GENE-5823874 | Length: | 1689 | Species: | Xenopus tropicalis |
Alignment Length: | 2580 | Identity: | 496/2580 - (19%) |
---|---|---|---|
Similarity: | 782/2580 - (30%) | Gaps: | 1257/2580 - (48%) |
- Green bases have known domain annotations that are detailed below.
Fly 254 SSHTSSSSSSSSSGEPNLPYPGFPEISIRALTQYTRPRNWCLMLITNPWFERVSILVILLNCITL 318
Fly 319 GMYQPCVDDACVTNRCK-ILQIFDDIIFAFFALEMTIKMVAMG-ICGKNTYLADSWNRLDFFIVL 381
Fly 382 AGL----LEYVMHVENL--------NLTAIRTIRVLRPLRAINRIPSMRILVMLLLDTLPMLGNV 434
Fly 435 LLLCFFVFFIFGIIGVQLWEGILRQRCSLMRTEGMVYPLTVPEVYRVRVRVNSLSQYYEFSKDQD 499
Fly 500 YICSTPNDSGMHLCGNFPPYRIGSLVCNEEAKLFDFNEPTNTS------CVNWNQYYTTCKQSGE 558
Fly 559 NPFQGTISFDNIGMAWVAIFLVISLEGWTDIMYYVQDA-HSFWDWIYFVLLIVIGSFFMINLCLV 622
Fly 623 VIATQFSETKKREMERMRQERARYTSTSTLASSTNNSEPATCYAEIVKYIAHLWRRFKRRMLKKY 687
Fly 688 RLYKYQRQQRKEGLLPNADNLTFSPSRIKCHHPKCPKYSNRKPSSIQDQMITVMVPLNSASNNIN 752
Fly 753 NNNNNNSNSSNHNGSGNHTAAGGGNNNNNNNNNNAASCTTVALVNGINGSAASVTMSSAHHQQHQ 817
Fly 818 LLQHQQQQHQNQQQQQQQQQHSSSDNTEQSLAPDGLPRSSSLKKSTAHHQLKPEGSAAEQKTILL 882
Fly 883 KFPQQMIDSEQLILQLGNLGKSHPCTSGFLSPPTSASRRPSVMFNEYVLLHTPPALNADPATAGT 947
Fly 948 TTTVAPTVATVAGTAAAAAAAAATGSGSGNNNHQNGGASGGAGTGGTTEKSNIFSTEKMTQAGDG 1012
Fly 1013 SIWQVNLPQTIGTIANPYADCSELGIHDAMTCQELLAFSVAFSAALPTGQSTLESFYTSLARCDP 1077
Fly 1078 HTAEALRAHHKPRSVPTGQNQTTPGAEGATVMVASTAGDTGQTLQPSTVSAVVGGTIDSHAANHR 1142
Fly 1143 RKEHHQQSHHHHNNNNTTSHSRNYRSRQGQGNSRMREPRAPTGNYMEDYACCYDLYQNALSPLDE 1207
Fly 1208 RPRQRSPTTRCLISVYRCMSRVCSWIRRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQPPEL 1272
Fly 1273 TAIVETSNVVFSGIFAVEMLLKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMGNGTGGGGS 1337
Fly 1338 GLSVLRTFRLLRILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGGKFCK 1402
Fly 1403 FLDESGLERECTCPEIISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGMEK------ 1461
Fly 1462 TSHWAALYFVALMTFGNYVLFNLLVAILVEGFSSERNERREREQRELVKKLREETLAENYSDGMY 1526
Fly 1527 DESRSEADSSTTNDSYYEVRNRWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPA 1591
Fly 1592 SSAAPSASGTSGASAPGDRERDRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTY 1656
Fly 1657 SIKERRSEAPRLSKIRLARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPP 1721
Fly 1722 NIFTGGQRSLDEGIPSIDLIPPSPVLSHKPLNILNASQLGV-GMGGGVPSTAGSSSSMHSVIIDD 1785
Fly 1786 ISKSSSSTAAATPIYVPTISSTADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGSSS 1850
Fly 1851 SERLPLAPPPQQGSFKQRLRRGSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNG 1915
Fly 1916 GDNSCLLRNSNAVVSGSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNL 1980
Fly 1981 NQPPKLRPGSGQRRMSSIELAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDNM 2045
Fly 2046 LQQYMEARDKRKNSISHYNLKKRLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRLS 2110
Fly 2111 KDQQQLAMQPHSMVPGGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDNRFRQICTWFVNQK 2175
Fly 2176 WFDNVVLLFIALNCITLAMERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAY 2240
Fly 2241 FTSGWNIMDGSLVTISIID--LLMSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQT 2303
Fly 2304 LLSSLRPIGNIVLICCTFFIIFGILGVQLFKGTFYYCEGENIKGVRNADECR------------- 2355
Fly 2356 -RIPGNVWTNRKYNFDDLGKALMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIA 2419
Fly 2420 FILLVGFFVLNMFVGVVVENFHRCREEQEKEEKIRRAAKRALQMEKKRRRMHEPPYYTNYSPTRM 2484
Fly 2485 FVHNV---VTSKYFDLAIAAVIGLNVVTMAMEYYKMPSGLKYALKIFNYFFTAVFILEANMKLVA 2546
Fly 2547 LGWKLYLKDRWNQLDVGIVLLSIVGIVLEELETNTHQIIPINPTIIRV----MRVLRIARVLKLL 2607
Fly 2608 KMANGIRALLDTVM---QALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHF 2669
Fly 2670 ANFGMAFLTLFRVATGDNWNGI-MKDTLRDNCDDAADCV---RNCCVSSVIAPIFFVIFVLMAQF 2730
Fly 2731 VLVNVVVAVLM---------------KHLEESHKQMEDELDMEVE 2760 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 93/324 (29%) |
Ion_trans | 1261..1495 | CDD:278921 | 84/239 (35%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 97/271 (36%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 73/228 (32%) | ||
cacna1s | XP_031752682.1 | Ion_trans | 50..340 | CDD:395416 | 106/358 (30%) |
Ion_trans | 427..668 | CDD:395416 | 92/300 (31%) | ||
Ion_trans | 794..1071 | CDD:395416 | 105/288 (36%) | ||
Ion_trans | 1113..1377 | CDD:395416 | 86/270 (32%) | ||
GPHH | 1386..1439 | CDD:407139 | 5/15 (33%) | ||
Ca_chan_IQ | 1450..1521 | CDD:400901 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |