Sequence 1: | NP_001259267.1 | Gene: | Ca-alpha1T / 31550 | FlyBaseID: | FBgn0264386 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012826714.1 | Gene: | scn3a / 100125099 | XenbaseID: | XB-GENE-5812330 | Length: | 2019 | Species: | Xenopus tropicalis |
Alignment Length: | 2591 | Identity: | 541/2591 - (20%) |
---|---|---|---|
Similarity: | 918/2591 - (35%) | Gaps: | 935/2591 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 284 LTQYTRPRNWCLMLITNPWFERVSILVILLNCITLGMYQPCVDDACVTNRCKILQIFDDIIFAF- 347
Fly 348 --FALEMTIKMVAMGICGKN-TYLADSWNRLDFFIVLAGLLEYVMHVENL-NLTAIRTIRVLRPL 408
Fly 409 RAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRCSLMRTEGMVYPL 473
Fly 474 TVPEVYR------VRVRVNSLSQYYEFSKDQDYICSTPNDSGMHLCGNFPPYRIGSLVCNEEAKL 532
Fly 533 FDFNEPTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMYYVQDAH 597
Fly 598 SFWDWIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERARYTSTSTLASSTNNSEPA 662
Fly 663 TCYAEIVKYIAHLWRRFKRRMLKKYRLYKYQRQQRKEGLLPNADNLTFSPSRIKCHHPKCPKYSN 727
Fly 728 RKPSSIQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAAGGGNNNNNNNNNNAASCTT 792
Fly 793 VALVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQHSSSDNTEQSLAPDGL---- 853
Fly 854 --PRSSSLKKSTAHHQ--LKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGKSHPCTSGFLSP 914
Fly 915 PTSA-----SRRPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAAAATGSG 974
Fly 975 SGNNNHQNGGASGGAGTGGTTEKSNIFSTEKMTQAGDGSIWQVNLPQTIGTIANPYADCSELGIH 1039
Fly 1040 DAMTCQELLAFSVAFSAALPTGQSTLESFYTSLARCDPHTAEALRAHHKPRSVPTGQNQTTPGAE 1104
Fly 1105 GATVMVASTAGDTGQT--LQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNNTTSHSRNYR 1167
Fly 1168 SRQGQGNSRMREPRAPTGNYMEDYACCYDLYQNALS----------PLDERPRQRSPTTRCLISV 1222
Fly 1223 YRCMSRVCSW--IRRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETSNVVFSG 1285
Fly 1286 IFAVEMLLKVVAEGPFRYIANGFNVFDGIIVILSAIEICQTFMGNGTGGGGSGLSVLRTFRLLRI 1350
Fly 1351 LKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGGKFCKFLDESGLERECTC 1415
Fly 1416 ---PEIISRHPQCECDRKHFNNILWATVTVFQILTQEDWNVVLFNGMEKTSHWAAL-YFVALMTF 1476
Fly 1477 GNYVLFNLLVAILVEGFSSERNERREREQRELVKKLREETLAENYSDGMYDESRSEADSSTTNDS 1541
Fly 1542 YYEVRNRWRSAEDVRKLQDSVELIIEAKSNMHRQRLLQPTHDYQINELPASSAAPSASGTSGASA 1606
Fly 1607 PGDRERDRDRDRDRERDRDRDRERDREAGGGGKEEGAQHAKPRGGLKKTYSIKERRSEAPRLSKI 1671
Fly 1672 RLARDPPIITTTAATPQDSPSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPNIFTGGQRSLDEGIP 1736
Fly 1737 SIDLIPPSPVLSHKPLNILNASQLGVGM-------GGGVPSTAGSSSSMHSVIIDDISKSSSSTA 1794
Fly 1795 AATPIYVPTISSTADAQSQSHSLNDVSVGSSPGGEIPATGMSRNANTGASTSGSSSSERLPLAPP 1859
Fly 1860 PQQGSFKQRLRRGSSKKRRASALALATDDNPARRTLDNQARRTQDEEEEQQQLNNGGDNSCLLRN 1924
Fly 1925 SNAVVSGSSSGTKETNRLSPQNSIRRLSNTLSIGSGPVGSRRASACIFNSQVYQNLNQPPKLRPG 1989
Fly 1990 SGQRRMSSIELAFSKTSHLNLHNLEANRKSLSYTNSKMDLDKWNKSYGNLNEPDNMLQQYMEARD 2054
Fly 2055 KRKNSISHYNLKKRLEEKELQQLQQLHQQQLLQQRQDSFSSTTQQQQQQLQQHRLSKDQQQLAMQ 2119
Fly 2120 PHSMVPGGGERYSKLKMLIEQLTPKHFTTEREDYSLYIFPEDNRFRQICTWFVNQKWFDNVVLLF 2184
Fly 2185 IALNCITLAMERPNIPPSSTERLFLATANYVFTVVFTVEMFIKVVATGMFYGHDAYFTSGWNIMD 2249
Fly 2250 GSLVTISIIDLLMSLISESSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNI 2314
Fly 2315 VLICCTFFIIFGILGVQLFKGTFYYCEGE------NIKGVRNADECRRIPGN----VWTNRKYNF 2369
Fly 2370 DDLGKALMSLFVLSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVG 2434
Fly 2435 VVVENFHRCREE--------QEKEEKIRRAAKRALQMEKKRRRMHEPPYYTNYSPTRMFVHNVVT 2491
Fly 2492 SKYFDLAIAAVIGLNVVTMAMEYYKMPSGLKYALKIFNYFFTAVFILEANMKLVALGWKLYLKDR 2556
Fly 2557 WNQLDVGIVLLSIVGIVLEELETNTHQIIPINPTIIRVMRVLRIARVLKLLKMANGIRALLDTVM 2621
Fly 2622 QALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLTLFRVATGD 2686
Fly 2687 NWNGIMKDTLRD---NCDDAAD----CVRNCCVSSVIAPIFFVIFVLMAQFVLVNVVVAVLMKHL 2744
Fly 2745 ----EESHKQM-EDELDMEVEL-ERELVREQEFAQEQKLCQQLAEAQSKAAAPPRP 2794 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1T | NP_001259267.1 | Ion_trans | 332..636 | CDD:278921 | 84/314 (27%) |
Ion_trans | 1261..1495 | CDD:278921 | 76/237 (32%) | ||
Ion_trans | 2192..2448 | CDD:278921 | 89/273 (33%) | ||
Ion_trans | 2510..2728 | CDD:278921 | 71/224 (32%) | ||
scn3a | XP_012826714.1 | Ion_trans | 151..430 | CDD:278921 | 85/323 (26%) |
Na_trans_cytopl | 512..627 | CDD:288761 | 33/188 (18%) | ||
Ion_trans | 786..982 | CDD:278921 | 68/220 (31%) | ||
Na_trans_assoc | 1008..1216 | CDD:284034 | 67/635 (11%) | ||
Ion_trans | 1239..1496 | CDD:278921 | 89/263 (34%) | ||
Na_channel_gate | 1488..1540 | CDD:240441 | 10/57 (18%) | ||
Ion_trans | 1562..1800 | CDD:278921 | 77/247 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |