DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep1 and frma

DIOPT Version :10

Sequence 1:NP_511056.2 Gene:Nep1 / 31547 FlyBaseID:FBgn0029843 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster


Alignment Length:717 Identity:144/717 - (20%)
Similarity:262/717 - (36%) Gaps:217/717 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 SDPCEDFFQYACGTWNKMHPIPE-----DRSSISTFEVLSDQQQVILRAVLEEPIDERDNKATIK 252
            :|||::|::.|||.|:..|....     ||...:..|.|:|        :|:...::.:.....:
  Fly    25 ADPCQNFYKVACGNWSASHATDSYESFMDRLDYNYQEKLAD--------LLDNEREDDEPHFLQQ 81

  Fly   253 AKTFFKSC------------------MDIPQIRKIGTG-----RLKQVLQSLGG------WPVI- 287
            .:.|:.:|                  |:..|..::..|     || |||..|..      |..: 
  Fly    82 LRNFYTACRKPLSQDQVLRILEHLIVMENIQNEELSVGLTAAFRL-QVLIDLNDSNTYDIWKQLM 145

  Fly   288 --ERNWSPPADLSVERLMGQLRLNYSEPVMIELYVGADDKNSSVNILQMDQLQYALPS-----RD 345
              .::|.|             .....||:..|::               |:|..:||.     ::
  Fly   146 SHRKHWDP-------------NTTNREPLTREMF---------------DKLWASLPKIPFPFKE 182

  Fly   346 YYLKESSANDRRAYHRYMTQVALLLGADPATAAAEL-EKVVLFETQLVNVSLPEADRHDT-SLVY 408
            ||.:|.|                           || ||::.:.:        |.|..|: .||.
  Fly   183 YYWRELS---------------------------ELEEKIMSYGS--------EDDGFDSGDLVT 212

  Fly   409 RKMLLPELQELVP----EVQWQEYLQAALGPGIPLQEDEPLVTYGLHYLTEMGKILA-------- 461
            |   :|... ::|    .:.::...|.|  ..:.::.:|.::||....|    |::|        
  Fly   213 R---IPPFW-MMPWPNGNITYENLSQMA--HWLDIKANEFILTYIYMRL----KLVAEGVSTESW 267

  Fly   462 HTDRRVVHNYMLWRLVMSLMSHMIDEYQRERVEFRKILMGIQSE-RTRWSQCVEWTNKKLGVAVG 525
            |.||.......  |.::|..:..:.|....|::...:|..|.:| :.|:.|       ||     
  Fly   268 HIDRDQCAEQS--RQILSHPAAWLVEKNHPRLKEEPVLQDIFAELKQRFGQ-------KL----- 318

  Fly   526 ALFIRDNFNQESKEVALEMIHTIRAAFNELLAENDWMDDETRAVAKEKAD---SMNERIGYPELL 587
             |..|:||.:.::...|..:..:|...: :|..|.......|.:.:...|   :.::..|...:.
  Fly   319 -LANRNNFTRSTQHFLLGKLKRMRLRLS-ILPRNSSAQSMVRRIERHYRDVHMNASDYFGNLHIG 381

  Fly   588 TNATELEQEYVNL-------TIVPDNFINNVLSILQWESEKMLRLLRQPVDKEKWTTEPAVVNAF 645
            .|.:...::|..|       .::|.....:.|               .|.....:.|   ..:||
  Fly   382 LNHSRSHKKYAQLWAIVFGRQLIPSRISKSDL---------------YPTQVRGYGT---YASAF 428

  Fly   646 YNPNKNDIVFPAGILQPLFYSQHFPKSLNYGGIGVVIGHEITHGFDDKGRQFDKEGNMMQWWNNA 710
            |...:|.::.|..:|:|.||:...|..|.|..:|.::|||::||||.:|..|...|     ..::
  Fly   429 YIVKQNMLIVPLSLLEPPFYTHGQPSILTYSALGFILGHELSHGFDSEGMTFSSHG-----VGSS 488

  Fly   711 TIE-------AFRERTQCVIDQYSRYKINEVDMFMDGRMTQGENIADNGGLKQAFRAY-KKWETL 767
            .::       .|::...|:..::.|.:.              |..||..||:.|:.|| ...:|.
  Fly   489 AVDRELDRNPRFQQELGCLRRRFGRKRY--------------EKFADASGLELAYSAYFDTAQTD 539

  Fly   768 HGREQQLPGLNMTHDQLFFLNYAQIWCGSMRPEDALTKIRSAVHSPGFVRVLGPLSNSRDFASAY 832
            |.|.:....| :|..|.||.|:||.:|....      .:::..|.....||...:::...|..|:
  Fly   540 HKRNRSAEEL-VTQKQQFFHNFAQFFCSDKE------LLQAHDHGSDRKRVNDAVAHFEPFREAF 597

  Fly   833 KC 834
            .|
  Fly   598 SC 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep1NP_511056.2 M13 194..847 CDD:341056 144/716 (20%)
frmaNP_572226.2 GluZincin 25..601 CDD:472708 144/717 (20%)

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