DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep1 and nep-24

DIOPT Version :9

Sequence 1:NP_001284925.1 Gene:Nep1 / 31547 FlyBaseID:FBgn0029843 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_503005.3 Gene:nep-24 / 190993 WormBaseID:WBGene00013786 Length:567 Species:Caenorhabditis elegans


Alignment Length:616 Identity:127/616 - (20%)
Similarity:242/616 - (39%) Gaps:139/616 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 GSAHEGQDNICMTQECVRTAASLLSAMDLNSDPCEDFFQYACGTWNKMHPIPEDRSSISTFEVLS 227
            |:......|:|.|..|:..|..|.:..|.:.|||::|.|:|||..::..  .||..:..|..:.:
 Worm    28 GATTPATRNVCNTPACITLAHMLHNYHDPSVDPCDNFHQFACGREHEHE--TEDIYTKKTKTINN 90

  Fly   228 DQQQVILRAVLEEPIDERDNKATIKAKTFFKSCMDIPQ----IRKIGTGRLKQVLQSLGGWPVIE 288
                 |::..|::....| :|:....:|.:|:|..:.:    .|......:.|.:||:|.|||::
 Worm    91 -----IMKRFLKKNETSR-SKSENAMRTLYKACKTLEKNSTASRNKALQDIFQDIQSIGAWPVVD 149

  Fly   289 RNWSPPA-DLSVERLMGQLRLNYSEPVMIELYVGADDKNSSV-----------------NILQMD 335
            ..|.... ||: :.|:..:||......:.::....:.:|.::                 .||:.:
 Worm   150 DKWDESKFDLN-DFLVNLVRLGRKNFGLFQMARYVNVRNFAIGPEAAWRHNVDLGKTISEILKAN 213

  Fly   336 QLQYALPSRDYYLKESSANDRRAYHRYMTQVALLLGADPATAAAELEKVV---LFETQLVNVSLP 397
            .:|              .|:::           ||  |.......|||.:   .|.|........
 Worm   214 SVQ--------------TNNKK-----------LL--DDLAEYVNLEKALSQHKFNTVQPGYIFS 251

  Fly   398 EADRHDTSLVYRKMLL----PELQELVPEVQWQEYLQAALGPGIPLQEDEPLVTYGLHYLTE--- 455
            |.....:|:.:.:::|    |:.:.|.|||                        |.:.|||.   
 Worm   252 ERSDFVSSVNFSRLVLEMMSPDKRTLFPEV------------------------YQIMYLTNTSL 292

  Fly   456 -MGK------ILAHTDRRVVHNYMLWRLVMSLMSHMIDEYQRERVEFRKILMGIQSERTRWSQCV 513
             .||      |:.:|.:|.:.||::::.:.:.::              .:..|..|     :.|.
 Worm   293 FFGKNNNLETIIRNTSKRALANYLIFKFIDTSIA--------------DLTYGSPS-----AFCE 338

  Fly   514 EWTNKKLGVAVGALFIRDNFNQESKEVALEMIHTIRAAFNELLAENDWMDDETRAVAKEKADSMN 578
            :.....|..|....|.|:..::|:::...::....:....:::...|||..:::.:|.::..|||
 Worm   339 QKVINFLPRAALRAFYRNFISKENRKKITKLTEATQVQLLKIIGATDWMSIKSKKIAMDRVSSMN 403

  Fly   579 ERIGYPELLTNATELEQ--EYVNLTIVPDNFINNVLSILQWESEKMLRLLRQPVDKEKWTTE--- 638
            ..||||:......:|:.  |::||: ..|.:...|        .|:.|.:|:. :.:.:|.|   
 Worm   404 MVIGYPDYFDPPGKLDGLFEHLNLS-SSDTYYTVV--------RKINRFMREQ-EMDYYTGEVPY 458

  Fly   639 ----PAVV-NAFYNPNKNDIVFPAGILQPLFYSQHFPKSLNYGGIGVVIGHEITHGFDDKGRQFD 698
                |.:: ||.||.|.|:::..|......|:...||...|.......:.||:.|.|....... 
 Worm   459 YPLFPGLMTNAMYNANDNNLMIFAPFFDDPFFDSSFPDYANIAFTSNTLAHEMGHTFSPHLMDI- 522

  Fly   699 KEGNMMQWWNNATIEAFRERTQCVIDQYSRY 729
            ..|....|......|.:.:|.:|:.|||:.|
 Worm   523 MTGTTEVWLTPKETEEYEKRVKCLEDQYTEY 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep1NP_001284925.1 M13 194..847 CDD:189000 119/585 (20%)
nep-24NP_503005.3 GluZincin 58..561 CDD:301352 119/586 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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