DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nep1 and nep-20

DIOPT Version :9

Sequence 1:NP_001284925.1 Gene:Nep1 / 31547 FlyBaseID:FBgn0029843 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_001317749.1 Gene:nep-20 / 188176 WormBaseID:WBGene00020293 Length:834 Species:Caenorhabditis elegans


Alignment Length:755 Identity:155/755 - (20%)
Similarity:282/755 - (37%) Gaps:197/755 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 GSAHEGQDNICMTQECVRTAASLLSAMDLNSDPCEDFFQYACGTWNKMHPIPEDRSSISTFEVLS 227
            |:..:.:.::|.:.:|:..|..|.:..|.:...|.:|::..||.:.....:.:.|.        :
 Worm   205 GARQDEKPSLCESPQCITLAFELSAYQDTSVSKCHNFYKATCGKYKHHQALDKHRD--------A 261

  Fly   228 DQQQVILRAVLEEPIDERDNKATIKAK------TFFKSCMDIPQIRKIGTGRLKQVLQSLGGWPV 286
            .:::|:.|.|.|   ..|.|:::|.:|      ..|..|....| .|......|.: :.:|.|||
 Worm   262 KKKEVVKRIVRE---FLRRNESSITSKFEPAIRLMFGKCNKFSQ-NKTYLDIFKDI-EKIGPWPV 321

  Fly   287 IERNWSPPADLSVERLMGQLRLNYSEPVMIELYVGADDKNSSVNILQMDQLQYALPSRDYYLK-- 349
            ::.:|                    ..||..|                         .||.|.  
 Worm   322 LKSDW--------------------VDVMFNL-------------------------NDYLLSLV 341

  Fly   350 ESSANDRRAYHRYMTQVALLLGADPATAAAE------LEKVVLFETQLVNVSLPEADRHDTSLVY 408
            |....|...:.....|:|  .|..|..|.:|      |||::|   :::..:..:|||...|...
 Worm   342 ELGFTDFGLFKLEFRQLA--FGQFPVIAPSEQKQGNQLEKIIL---EILEANGVQADRQKLSKYL 401

  Fly   409 RKM--LLPELQELVPE---VQWQEYLQAALGPGIP--LQEDEPLVT-YGLHYLTEMG-------- 457
            |:.  ...:|:.:..|   |::..|..:.|...|.  :|:..|:.| .||....:.|        
 Worm   402 REYSEFKSQLRHMSLEGTSVKYIRYNASTLSVNISALVQKMAPMSTSSGLVRRIQSGILITNSSS 466

  Fly   458 -------KILAHTDRRVVHNYMLWRLVMSLMSHMIDEYQRERVEFRKILMGIQSERTRWSQCVEW 515
                   .|:..|.:|.:.||:::        |.||              .:..:.|..::..|.
 Worm   467 FFGKNLDAIIQQTHKRTLANYLIF--------HFID--------------AVTFDLTSGAKHSEH 509

  Fly   516 TNKKLGVAVGALFI--RDNFNQESKEVALEMIHTIRAAFNELLAENDWMD-------DETRAVAK 571
            |...| :..|:|.:  :|..::|.:.|.:||...::....|:::|...:|       ::.|....
 Worm   510 TLIDL-LPRGSLQVLSQDFVDEEDQGVMVEMAKDLKKHVVEMISEGSSLDKGHLVFEEKERRKLI 573

  Fly   572 EKADSMNERIGYPELLTNATELEQEYVNLTIVPDNFINNVLSIL-QWESEKMLRLL---RQPVDK 632
            .|...:.....||..:.|     |.:..|.:...:.::.::..| ::.||:::..|   ..|.||
 Worm   574 RKVQDILVVTKYPLEILN-----QNFEKLNLTYSDSLHKIIQKLRRFRSEQLIEYLGGDLDPTDK 633

  Fly   633 EKWTTEPAVVNAFYNPNKNDIVFPAGILQPLFYSQHFPKSLNYGGIGVVIGHEITHGFDDKGRQF 697
            ..|.      :|.|....||::..|.|:...::...:|..:|...:|.:|..|:....|....:.
 Worm   634 GMWG------SAHYEQATNDLIIIAPIIDGPYFDTSYPNYVNIFFMGFIISRELGRSLDSVRIRK 692

  Fly   698 DKEGNMMQWWNNATIEAFRERTQCVIDQYSRYKINEVDMFMDGRMTQGENIADNGGLKQAFRAYK 762
            |::|:...|..:.:::.|....:|     .|.||.       |.....|.:||:.|.:.:|.|.|
 Worm   693 DEKGHTENWLKSESLKRFDNNVKC-----WRKKIT-------GTRFLNEMLADHVGHEASFMALK 745

  Fly   763 KW---------ETLHGREQQLPGLNMTHDQLFFLNYAQIWC-------GSMRPEDA----LTKIR 807
            ||         |.:.|.|      :||.:|:||...|..:|       |.:..:||    .|::.
 Worm   746 KWEKEMNGTIVEKIRGYE------SMTMEQIFFHLQALYFCRPPGGSTGELTAKDARQHYSTRVN 804

  Fly   808 SAVHSPGFVRVLGPLSNSRDFASAYKCPLGSTMNPAEKCS 847
            .|            ..|...||.|:.|.....||...||:
 Worm   805 EA------------FKNMPQFAKAFGCSSNQNMNSKTKCT 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep1NP_001284925.1 M13 194..847 CDD:189000 148/722 (20%)
nep-20NP_001317749.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.