DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep1 and F41C6.4

DIOPT Version :9

Sequence 1:NP_001284925.1 Gene:Nep1 / 31547 FlyBaseID:FBgn0029843 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_001129930.1 Gene:F41C6.4 / 185599 WormBaseID:WBGene00018278 Length:393 Species:Caenorhabditis elegans


Alignment Length:587 Identity:92/587 - (15%)
Similarity:161/587 - (27%) Gaps:275/587 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 LSAMDLNSDPCEDFFQYACGTWNKMHPIPEDRSSISTFEVLSDQQQVILRAVLEEPIDERDNKAT 250
            ::.:|.:||||:||:::||                                    |:.:.|....
 Worm    26 INLIDQSSDPCDDFYRHAC------------------------------------PVGDYDFLVL 54

  Fly   251 IKAKTFFKSCMDIPQIRKIGTGRLKQVLQSLGGWPVIERNWSPPADLSVERLMGQLRLNYSEPVM 315
            :|....||..               :..|....|               |.|..:..||..:|..
 Worm    55 MKYAPIFKEL---------------ETSQEESAW---------------ENLKIEEALNNIKPGE 89

  Fly   316 IELYVGADDKNSSVNILQMDQLQYALPSRDYYLKESSANDRRAYHRYMTQ-----VALLLGADPA 375
            ||..:.|..:.     :.:|..|...|:...:|..:   .:...|...|:     ..|.||.|..
 Worm    90 IENEISAYFER-----VFLDMCQNNDPAMTTFLLRT---QQMLSHEMSTKCRAENCLLRLGGDSN 146

  Fly   376 TAAAELEKVVLFETQLVNVSLPEADRHDTSLVYRKMLLPELQELVPEVQWQEYLQAALGPGIPLQ 440
            ...|..:    |::::       |.:.|:|                  .:|||:       :.|:
 Worm   147 CTRAAND----FKSRV-------AKKTDSS------------------HYQEYV-------LKLR 175

  Fly   441 EDEPLVTYGLHYLTEMGKILAHTDRRVVHNYMLWRLVMSLMSHMIDEYQRERVEFRKILMGIQSE 505
            |                            |...|:.....::.::|                   
 Worm   176 E----------------------------NIAGWKNKTRAVNILLD------------------- 193

  Fly   506 RTRWSQCVEWTNKKLGVAVGALFIRDNFN---QESKEVALEMI----HTIRAAFNELLAENDWMD 563
                      .|.|:||        ||.|   ....:|.|:.|    :..:..|..:|.|..|::
 Worm   194 ----------GNFKVGV--------DNINSFLMNMVDVLLQWIQVYKYIAKNPFELILQETPWVN 240

  Fly   564 DETRAVAKEKADSMNERIGYPELLTNATELEQEYVNLTIVPDNFINNVLSILQWESEKMLRLLRQ 628
            |:.                    :..|.|        .:..|.|:.:...|          .||:
 Worm   241 DQK--------------------INRALE--------AVARDLFVIDEYGI----------QLRE 267

  Fly   629 PVDKEKWTTEPAVVNAFYNPNKNDIVFPAGILQPLFYSQHF------------------------ 669
            .:|....|.:..:..:.....|:|:...       .||.||                        
 Worm   268 NIDALMKTEQDFLKCSADFSGKHDLFCS-------IYSYHFMFNGRTTTVLHFGYDATNRHPYIY 325

  Fly   670 ------------PKSLNYGGIGVVIGHEITHG-FDDKGRQF-----DKEG-NMMQWWNNATIEAF 715
                        ..:.|.|..|.|:|||::|. .::..:.:     ..|. |.:|...|.|...|
 Worm   326 FGMPFIARAANSEMAANLGLAGYVVGHELSHSLIENPSKSYLLPYSSAEAINCIQTQYNNTCAEF 390

  Fly   716 RE 717
            :|
 Worm   391 KE 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep1NP_001284925.1 M13 194..847 CDD:189000 90/579 (16%)
F41C6.4NP_001129930.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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