DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep1 and nep-8

DIOPT Version :9

Sequence 1:NP_001284925.1 Gene:Nep1 / 31547 FlyBaseID:FBgn0029843 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_001309548.1 Gene:nep-8 / 184631 WormBaseID:WBGene00017553 Length:686 Species:Caenorhabditis elegans


Alignment Length:723 Identity:150/723 - (20%)
Similarity:300/723 - (41%) Gaps:128/723 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 LVLAIAFTVLGAAIGALAIYFASVHQRCHLYRLEPDNDDRPNGRWNQ-DSGSAHEGQDNICMTQE 177
            |:|.|.|..:           .:||     .::||.|.|......|. ||       .|:|.:.|
 Worm    19 LLLLIVFLAM-----------VTVH-----IKVEPVNLDELLSIGNDVDS-------KNLCDSPE 60

  Fly   178 CVRTAASLLSAMDLNSDPCEDFFQYACGTWNKMHPIPEDRSSISTFEVLSDQQQVILRAVLEEPI 242
            |:..:..||:..|.:.|||.||||::||.:::.          |..|....:::.|||..:.|.:
 Worm    61 CITLSHELLNYQDPSVDPCVDFFQHSCGRFHEQ----------SVSESRLQKKKHILRKQIREFL 115

  Fly   243 DERDNKATIKAKTFFKSCMDIPQIR--------KIGTGRLKQV---LQSLGGWPVIERNW-SPPA 295
            .:..| :|.|::...|...|..:..        ||....:..|   ::.:|.||::::|| ....
 Worm   116 HKIQN-STSKSENLMKLVFDKCEASKKTSNDNYKISRDAIHDVFNDIKKIGAWPLLDKNWDGSKF 179

  Fly   296 DLSVERLMGQLRLNYSEPVMIELYVGADDKNSSVNILQMDQLQYALPSRDYYLKESSANDRRAYH 360
            ||: |.|...::|            ||.:       |.:.||.:.:.:...:::.:.......::
 Worm   180 DLN-EMLSNLVKL------------GATN-------LGLFQLDFRILTEGKFVRIAPTLGSIVHN 224

  Fly   361 RYM-TQVALLLGA-----DPATAAAELEKVVLFETQL--------VNVSLPEADRHDTSLVYRKM 411
            ..| :.::.:|.|     |....:.|.|:....:.:|        :::|||.....:.|.:..:|
 Worm   225 STMISMISEILEANGVQPDSEEISKEFEEYSSLQMKLAKYQSSGKLSISLPGVRSINFSSLITEM 289

  Fly   412 LLP-ELQELVPEVQWQEYLQAALGPGIPLQEDEPLVTYGLHYLTEMGKILAHTDRRVVHNYMLWR 475
            :.| .:.::..:::             .:..:.||. :..:....:..|:..|..:.:.|::::.
 Worm   290 IHPSRVSKIFGKIR-------------VVTSEHPLF-FKSNETESLDTIIESTSNKTLANFLIFN 340

  Fly   476 LVMSLMSHMIDEYQRERVEFRKILMGIQSERTRWSQCVEWTNKKLGVAVGALFIRDNFNQESKEV 540
            .:.|..:               |:.|     .|...|.:...::...|...:|:|:..::.:::.
 Worm   341 YIQSSYN---------------IMKG-----ARRGNCEDDVRREFPRASLRVFMRNFVDKGNRDG 385

  Fly   541 ALEMIHTIRAAFNELLAENDWMDDETRAVAKEKADSMNERIGYPELLTNATELEQEYVNLTI-VP 604
            ..::...::....|::.:.:.:....:....:|.:::...||||:.......|::|:.|..: ..
 Worm   386 VKKLTEELKKNTLEMIQDTENLAPPVKESMLKKVEAIKVTIGYPDHFDPPGTLDKEFENFDLDST 450

  Fly   605 DNFINNVLSILQWESEKMLRLL--RQPVDKEKWTTEPAVVNAFYNPNKNDIVFPAGILQPLFYSQ 667
            |::......:.:..||:.:..:  ..|:...|   |...|||.|..:||.:...|..|...|:..
 Worm   451 DSYYRIFQKLNRLRSEQQMEFIAGETPISPIK---EVLKVNANYKRSKNALTVFAPFLDDPFFDI 512

  Fly   668 HFPKSLNYGGIGVVIGHEITHGFDDKGRQFDKEGNMMQWWNNATIEAFRERTQCVIDQYSRYKIN 732
            .:|..:|....|.:|.|||.|..|..|..:|:.|..|.......:..:.::.||::|||..|...
 Worm   513 TYPDYVNLFFSGFLIAHEIGHSVDANGLGYDENGKPMDGIRLEHVTEYGKQGQCLVDQYDNYDDP 577

  Fly   733 EVDMFMDGRMTQGENIADNGGLKQAFRAYKKWETLHGREQQLPGL-NMTHDQLFFLNYAQIWCGS 796
            .....|:|..:..|.|||..|.:..:|||||.:|  .:...|.|| ::..|||:|...:.::|  
 Worm   578 VYGKKMNGTHSINEIIADWVGHEVTWRAYKKMDT--SKMLSLIGLKDINMDQLYFRVQSLLFC-- 638

  Fly   797 MRPEDALT 804
             |..|.::
 Worm   639 -RERDTIS 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep1NP_001284925.1 M13 194..847 CDD:189000 130/642 (20%)
nep-8NP_001309548.1 M13 76..664 CDD:341056 130/643 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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