DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep1 and nep-6

DIOPT Version :9

Sequence 1:NP_001284925.1 Gene:Nep1 / 31547 FlyBaseID:FBgn0029843 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_494537.1 Gene:nep-6 / 184628 WormBaseID:WBGene00017550 Length:726 Species:Caenorhabditis elegans


Alignment Length:714 Identity:163/714 - (22%)
Similarity:325/714 - (45%) Gaps:105/714 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 NICMTQECVRTAASLLSAMDLNSDPCEDFFQYACGTWNKMHPIPEDRSSISTFEVLSDQQQVILR 235
            |:|.|..||..|..||:..|.:.|||:||::.|||.::: |.:...|         ..::.:|::
 Worm    83 NVCETPGCVTLADQLLNFQDPSVDPCQDFYKAACGKYSE-HEVANRR---------LQKKDIIIQ 137

  Fly   236 AVLEEPI---DERDNKATIKAKTFFKSCMDIPQIRKIGTGRLKQV-------LQSLGGWPVIERN 290
            .:::..:   :..::|:....:..:::|..:.. .:|....:|..       :|.:|.||..::|
 Worm   138 RMIKNFLLKNETSESKSENVMRQVYRTCEGLKN-EEIFNANMKTAFRELFKDIQKIGSWPAADKN 201

  Fly   291 WSPPADLSVERLMGQLRLNYSEPVMIELYVGADDKNSSVNILQMDQLQYAL----PSRDYYLK-- 349
            |.            :.:||.:|.::              ||:::....:.|    |:...:|:  
 Worm   202 WD------------ETKLNLNEMLL--------------NIVKLGSSNFGLFQIRPTEVPFLEVA 240

  Fly   350 -------ESSANDRRAYHRYMTQVALLLGADPATAAAELEKVVLFETQLVNVSLPEADRHDTSLV 407
                   :.|||.::.....:.:..  |..|....|.::|..:..|..|...:      :|.:. 
 Worm   241 PDMARSPKVSANFQQIIFDILEKNG--LQPDENVIADDVEDYITLEETLSQYA------YDYNA- 296

  Fly   408 YRKMLLPELQELVPEVQWQEYLQAALGPG---IPLQEDEPLVTYGLHYL-----TEMGKILAHTD 464
             .|:...:||..||.::.::.::..:.|.   :.:.:.:|.:....|.|     ..:.|:|..|.
 Worm   297 -EKVQFSKLQAQVPSLKLEKIIEEMMNPNRKKLLVTKVKPRMVAHKHSLFFDEKMNLEKLLKSTP 360

  Fly   465 RRVVHNYMLWRLVMSLMSHMIDEYQRERVEFRKILMGIQSERTRWSQCVEWTNKKLGVAVGALFI 529
            :|.:.||    |:...|.|.::.            :.:.....:...|.:...:.|..|...:|:
 Worm   361 KRTLANY----LIFYYMDHAMNG------------LSVHDNVIKKRNCEKLVIEYLPKASLRVFV 409

  Fly   530 RDNFNQESKEVALEMIHTIRAAFNELLAENDWMDDETRAVAKEKADSMNERIGYPELLTNATELE 594
            |::|.:.:.::..||....:.:|.|:|.|:.|:..:::..|..|.:.|.:.||||:.......|:
 Worm   410 RNHFEKGNLKIVDEMAEETKKSFIEMLQESTWLGADSKKNAILKLEKMGKMIGYPKEFEKKGALD 474

  Fly   595 QEYVNLTIVPDNFINNVL-SILQWESEKMLRL--LRQPVDKEKWTTEPAVVNAFYNPNKNDIVFP 656
            :.:..|.::|.:.:..:| .|.::..|:.:..  |..|:|.   .....:.||||. ::|.:.|.
 Worm   475 KMFETLKLLPKDTLYGILKKIGRFHMEQGIEFVALETPMDP---VLPVLMTNAFYT-DRNHLSFL 535

  Fly   657 AGILQPLFYSQHFPKSLNYGGIGVVIGHEITHGFDDKGRQFDKEGNMMQWWNNATIEAFRERTQC 721
            .|.:....:...:||.:|....|.::.||.:||||..|.:.|:.|.:..|.....::.:.::|||
 Worm   536 VGYMDDPLFDATYPKYVNIALTGNILAHETSHGFDTAGIKRDENGEVRSWMKPEDLKEYGKKTQC 600

  Fly   722 VIDQYSRYKINEVDMFMDGRMTQGENIADNGGLKQAFRAYKKWETLHGREQQLPGL-NMTHDQLF 785
            ::|||:.|........::|..|..|.:||..|:..|::.::|.::  .:||::.|. |...|:|:
 Worm   601 LVDQYNEYDDPVFGKNLNGTTTLNEMVADMIGVTVAWKVFEKLDS--SKEQKVIGFENENIDKLY 663

  Fly   786 FLNYAQIWCGSMRPEDALTKIRSAVHSPGFVRVLGPLSNSRDFASAYKCPLGSTMNPAEKCSVW 849
            |...|..:| |:.|..:|.:..:.||..|..||.|..||...||:|:.||.||.|||..:||::
 Worm   664 FRAAALDFC-SLPPTTSLVEELTRVHPTGNFRVNGIFSNMPQFATAFNCPEGSPMNPKTRCSIF 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep1NP_001284925.1 M13 194..847 CDD:189000 152/687 (22%)
nep-6NP_494537.1 M13 105..724 CDD:189000 152/688 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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