DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nep1 and nep-16

DIOPT Version :9

Sequence 1:NP_001284925.1 Gene:Nep1 / 31547 FlyBaseID:FBgn0029843 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_001023203.2 Gene:nep-16 / 177541 WormBaseID:WBGene00018472 Length:868 Species:Caenorhabditis elegans


Alignment Length:744 Identity:150/744 - (20%)
Similarity:276/744 - (37%) Gaps:176/744 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 NICMTQECVRTAASLLSAMDLNSDPCEDFFQYACGTWNKMHPIPEDRSSISTFEVLSDQQQVILR 235
            |:|.|::|:..|..|.|.:|...:|||:|::|:|   .:.|....|: .:|....|.|:....:.
 Worm   232 NVCNTRQCIDIAFRLSSCIDDEIEPCENFYRYSC---QRYHSQTADK-QMSFLSQLKDESLRRMH 292

  Fly   236 AVLEEPIDER-DNKATIKAKTFFKSCMD------------IPQIRKIGTGRLKQVLQSLGGWPVI 287
            ::|....|.| ..|:...:::.:.:||:            :..||....|.|.:..|:.      
 Worm   293 SLLSSEEDSRLLPKSARLSRSLYSACMNAVLRSSNAPTDLLTFIRNFPCGPLLRDCQNF------ 351

  Fly   288 ERNWSPPAD-LSVERLMGQL-----RLN---YSEPV------MIELYVGADDKNSSVNILQMDQL 337
                  .|| .|.||..|.|     |.|   |...|      .|.|.:...|....|.:::.|.:
 Worm   352 ------HADSYSWERHAGMLDWYAGRYNLIVYDRDVHPQDRSKIILQIKPPDLTPIVGLIERDLI 410

  Fly   338 QYALPSRDYYLKESSANDRRAYHRYMTQVAL---LLGA--------DPATAAAELEKVVLFETQL 391
            ..|.||...:             ..:.|::|   ||.|        ||....::|::|.     .
 Worm   411 DLARPSPTEF-------------EPLLQLSLRQNLLSAFARDSLLRDPRDVQSQLDEVA-----R 457

  Fly   392 VNVSLPEADRHDTSLVYRK--MLLPELQELVPEVQWQEYLQAALGPGIPLQEDEPLVTYGLHYLT 454
            :.|.|..:.|...||....  |.:.|:.:.:|::..:|:|.|.|.......|.:.|......|..
 Worm   458 LMVDLYISARQSASLTPNTTYMTIGEMFQALPQLYLREFLDAQLSNTYRWTETDMLSIQDYDYFA 522

  Fly   455 EMGKILAHTDRRVVHNYMLWRLVMSLMSHMI---DEYQRERVEFRKILMGIQSERTRWSQCVEWT 516
            .:..|:|.|.|:.|.||:|...|.:|..:..   |:|                   .|.:||:..
 Worm   523 RLSDIMAQTSRQAVANYLLTVTVWNLKQYSYSPRDQY-------------------GWRECVDQI 568

  Fly   517 N-----KKLGVAVGALFIRDNFNQESKEVAL----EMIHTIRAAFNELLAENDWMDDETRAVAKE 572
            :     :|:.|           ::.|:.:.|    |.:..::..|..:          .|:...:
 Worm   569 SSFEIGRKMYV-----------DKASQTIDLPKIQEFLQNLKIDFLSV----------HRSTPLQ 612

  Fly   573 KADSMNE---RIGYPELLTNATELEQEYVNLTIVPDNFINNVLSILQWESEKMLRLLRQPVDKEK 634
            ...::|.   .:|:|..|.|...:.:....:::...::.::::.:.:.|.:..:..:...:|.:.
 Worm   613 YLSNINRLGFYVGFPRRLQNEELIWKPVSQVSLNETDYFDSMIRVGKAERDYTMSQIGTYLDNDD 677

  Fly   635 WTTEP-AVVNAFYNPNKNDIVFPAGILQPLFY--SQHFPKSLNYGGIGVVIGHEITHGF---DDK 693
            .||.| :.....||.|...||.|...::|..|  ....|....|..:|:.....|:..|   .||
 Worm   678 TTTFPISDPTMLYNSNVGAIVIPLAFIEPPIYLPGDEVPMYGIYSSLGITTLQMISKVFWQGLDK 742

  Fly   694 GRQFDKEGNMMQWWNNATIEAFRERTQCVIDQYSRYKINEVDMFMDGRMTQGENIADNGGLKQAF 758
            ..|.:...|:.:.:    ::|.|:|:..:                :..:.....:||  ..|.|.
 Worm   743 TSQLECLDNVFRGF----LDANRQRSPNI----------------EPELLATIELAD--AFKSAL 785

  Fly   759 RAYKKWETLH--GREQQLPGLNMTHD-QLFFLNYAQIWC---GSMRPEDALTKIRSAVHSPGFVR 817
            .:|.||:..|  ..|:.||..:.|.. :...|.::.::|   ||....|....|.:..       
 Worm   786 YSYAKWQNDHHIHHEKTLPAFDSTDSMRSLMLTFSTMFCSGEGSEPGSDYEAMINTVA------- 843

  Fly   818 VLGPLSNSRDFASAYKCPLGSTMNPAEKC 846
                 .|||.|:..:.|...|.:.....|
 Worm   844 -----ENSRMFSIHFNCNNSSRLYNRRTC 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep1NP_001284925.1 M13 194..847 CDD:189000 142/721 (20%)
nep-16NP_001023203.2 GluZincin 254..>725 CDD:387391 107/544 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.