DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep1 and nep-17

DIOPT Version :10

Sequence 1:NP_511056.2 Gene:Nep1 / 31547 FlyBaseID:FBgn0029843 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_001254395.1 Gene:nep-17 / 174996 WormBaseID:WBGene00010070 Length:1589 Species:Caenorhabditis elegans


Alignment Length:752 Identity:210/752 - (27%)
Similarity:332/752 - (44%) Gaps:135/752 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 AMDLNS--DPCEDFFQYACGTWNKMHPIPEDRSSISTFEVLSDQQQVILRAVLEEPIDE---RDN 247
            |..:|:  |||:||:.||||.:|:         |:| |.....|..|.:...||:|..:   ..:
 Worm   877 AKSVNTAIDPCDDFYSYACGNFNQ---------SVS-FYTARAQNLVYMAQKLEDPTYQTTINSS 931

  Fly   248 KATIKAKTFFKSCMDIPQIRK------IGTGRLKQVLQSL------------GGWPVIERNWSPP 294
            .|..|.|..:.:|:......:      |....::..:..|            ||.|.:      |
 Worm   932 PALKKEKQLYNACLTATASSQSEDQILISKNYIQTKVDDLKTLIGQDFTLVNGGAPKL------P 990

  Fly   295 ADLSVERLMGQLRLNYSEPVMIELYVGA---DDKNSSVNILQMDQLQYALPSRDYYLKESSANDR 356
            :...:...:|.|........:|...|..   |  ||....:.:|| ..|..|:.||...:...::
 Worm   991 SAKQIGDALGYLSFEQGIDTLISPLVDTYWID--NSKGYQMFIDQ-NTAYLSKTYYQPAAWKIEK 1052

  Fly   357 RAY--------HRYMTQVALLLGADPATAAAELEKVVLFETQL-VNVSLPEADRHDTSLVYRKML 412
            ..|        .||..:..:.|   ||.|:..|..|:.:|..: |..|..:..|..   ..|...
 Worm  1053 PKYLKMALDVVTRYAREQNITL---PAGASDLLSNVLDYEQNIAVKYSTDDNTRRQ---FQRSWN 1111

  Fly   413 LPELQELVPE---VQWQEYLQAALGPG------------IPLQEDEPLVTYGLHYLTEMGKILAH 462
            |.:..:||.:   :.|..||..|  |.            :.:.|.:.|..:...||.:..::|. 
 Worm  1112 LTKTSDLVTKYNFMDWMTYLSHA--PNAVKAKITDANYQVSVMEVDRLTHFSADYLQQSPELLV- 1173

  Fly   463 TDRRVVHNYMLWRLVM----------SLMSHMIDEYQRERVEFRKILMGIQSERT---------- 507
                   |.:..||::          |....|.||         .|.:|:...:|          
 Worm  1174 -------NLLFVRLLLGNAQYIPSYASAFRGMTDE---------SIFLGLSRRKTIPNHIPPPNF 1222

  Fly   508 ----RWSQCVEWTNKKLGVAVGALFIRDNFNQESKEV------ALEMIHTIRAAFNELLAENDWM 562
                ....|....|..:..|.|.:|: |.....:::|      |..:|..:.::|..::.:.|||
 Worm  1223 DLEANGPACASVANNLMQFANGRVFV-DYMYPTAQDVTNIRKSAGGIIKNVISSFQGMIDQLDWM 1286

  Fly   563 DDETRAVAKEKADSMNERIGYPELLTNATELEQEYVNLTIV-PDNFINNVLSILQWE-SEKMLRL 625
            ..:|:..|..|...:.:.|.:|:.:.|.|.|...|..|.|. .|||.:....::::. ..:..:|
 Worm  1287 APDTKQKAYAKTVQIQQNIAFPDWIKNDTLLGNYYSTLVIADSDNFYDIYDKLIKFNIFVQYNQL 1351

  Fly   626 LRQPVDKEKWTTEPAVVNAFYNPNKNDIVFPAGILQPLFYSQHFPKSLNYGGIGVVIGHEITHGF 690
            .....|:..:..:|..|||:|.|..|.|.||||||.|.:::.::|.|:||||:|:|.|||:||||
 Worm  1352 NAAQTDRTDFLGQPGTVNAWYQPELNSITFPAGILVPPYFNPNWPPSINYGGMGLVAGHELTHGF 1416

  Fly   691 DDKGRQFDKEGNMMQWWNNATIEAFRERTQCVIDQYSRY----KINEVDMFMDGRMTQGENIADN 751
            ||:|.|:...||:.:|.::.::..|:..:||||::||.:    ..|.....:.|..|||||||||
 Worm  1417 DDQGVQWGPTGNLARWMDDNSMAGFKNMSQCVINEYSGFCPLNATNYSPNCVKGPQTQGENIADN 1481

  Fly   752 GGLKQAFRAYKKWETLHGREQQLPGL---NMTHDQLFFLNYAQIWCGSMRPEDAL-TKIRSAVHS 812
            ||:..||.|||..::|.|.:.:||..   ..|||||||:::||:||...|.:||| |:|....||
 Worm  1482 GGVHAAFNAYKTHQSLDGPDPRLPDRLFGQFTHDQLFFMSFAQVWCEVRRTDDALYTQIMVDPHS 1546

  Fly   813 PGFVRVLGPLSNSRDFASAYKCPLGSTMNPAEKCSVW 849
            |...||.|.:.|...|.:|:.|||||...|.:.|.||
 Worm  1547 PSMYRVYGTIQNFPAFQTAFNCPLGSKSAPEQHCEVW 1583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep1NP_511056.2 M13 194..847 CDD:341056 205/740 (28%)
nep-17NP_001254395.1 M13 112..831 CDD:341056
M13 884..1581 CDD:341056 205/741 (28%)
Blue background indicates that the domain is not in the aligned region.

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