DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep1 and nep-3

DIOPT Version :10

Sequence 1:NP_511056.2 Gene:Nep1 / 31547 FlyBaseID:FBgn0029843 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_494679.2 Gene:nep-3 / 173730 WormBaseID:WBGene00016778 Length:634 Species:Caenorhabditis elegans


Alignment Length:768 Identity:182/768 - (23%)
Similarity:320/768 - (41%) Gaps:180/768 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LLVLAIAFTVL--------GAAIGALAIYFASVHQRCHLYRLEPDNDDRPNGRWNQDSGSAHEGQ 169
            :::||:...|:        ...||      ..|.:.|.                |..:.||....
 Worm    16 IIILAVPIIVILPLVLLLEAGKIG------GEVSENCS----------------NHSTSSASPKP 58

  Fly   170 DNICMTQECVRTAASLLSAMDLNSDPCEDFFQYACGTWNKMHPIPEDRSSISTFEVLSDQQQVIL 234
            ..:|:|.||:.....||:..|.:.||||:|:|.|||.:|:.:.|...|:        :.:||::.
 Worm    59 KPMCLTPECITLVHQLLNFQDPSVDPCENFYQAACGKYNEHNVIDGSRT--------AQKQQIVK 115

  Fly   235 RAVLEEPIDERDNKATIKA----KTFFKSCMDIPQIRKIGTGRLKQV----LQSLGGWPVIERNW 291
            |.:.:  ...::..:|.|:    |..::.|.:...|:.:|...|.|.    :|.:|.|||::.||
 Worm   116 RLIRD--FLHKNQSSTSKSENSMKLLYEKCKEAKTIKVLGNQNLLQEIFMNIQKIGSWPVLDENW 178

  Fly   292 SPPADLSVERLMGQLRLNYSEPVMIELYVGADDKNSSVNILQMDQLQYALPSRDYYLKESSANDR 356
            ........|.|:..:||..|.....|:.:.:|   :.|.|         .|:|::..:|:.::  
 Worm   179 DGKKFNLNEMLLSLIRLGVSNFGFFEIIISSD---AFVEI---------KPARNFPTRENLSD-- 229

  Fly   357 RAYHRYMTQVALLLGADPATAAAELEKVVLFETQLVNVSLPEADRHDTSLVYRKMLLPELQELVP 421
                 .:::|.|..|..|                  |::..|.|            |.|.:.|..
 Worm   230 -----IISKVFLGNGFQP------------------NITAIEND------------LREYENLQR 259

  Fly   422 EVQWQEYLQAALGPGIPLQEDEPLVTYGLHYLTEMGKILAHTDRRVVHNYMLWRLVMSLMSHMID 486
            |                              |..:.:::..|..|.:.||:::..:.|:|.    
 Worm   260 E------------------------------LKSLERLIQTTPNRSLVNYLIFNYLKSVML---- 290

  Fly   487 EYQRERVEFRKILMGIQSERTRWSQCVEWTNKKLGVAVGAL-------FIRDNFNQESKEVALEM 544
            ||:|...|                ||.       ||.:..|       |:::..::|:::....|
 Worm   291 EYKRLPEE----------------QCE-------GVVIDFLPRASTRVFVQNFLDKENRKYVAGM 332

  Fly   545 IHTIRAAFNELLAENDWMDDETRAVAKEKADSMNERIGYPELLTNATELEQEYVNLTI-VPDNFI 608
            |..::..|.:::.|:.|:::|::.||.:|..::...||||:.......|::.:.:|.| ..|::.
 Worm   333 IEDVKMGFIDMIQESTWLNEESKKVAVQKVKNIKSMIGYPDFFEPPGTLDRSFKDLNIEQTDSYH 397

  Fly   609 NNVLSILQWESEKMLRLLRQ--PVDKEKWTTEPAV-VNAFYNPNKNDIVFPAGILQPLFYSQHFP 670
            ..|..|.::.:|:.:..:..  |:|..    :|.: .||||. |.|.:...|.:|....:...||
 Worm   398 TIVRKIQKFTNEQCMEFVASEIPLDPR----QPILHANAFYQ-NTNFLAILAPVLDDPIFDTTFP 457

  Fly   671 KSLNYGGIGVVIGHEITHGFDDKGRQFDKEGNMMQWWNNATIEAFRERTQCVIDQYSRYKINEVD 735
            :.:|...||.|:.|||.|.||..|..:|..|....|......|.:.:|.:|::.|:..|...:..
 Worm   458 RYVNLAVIGNVLAHEIGHAFDHTGINYDDAGQQRIWLTPEDSEEYGKRLRCLLRQHDEYDDPDFG 522

  Fly   736 MFMDGRMTQGENIADNGGLKQAFRAYKKWETLHGREQQLPGL-NMTHDQLFFLNYAQIWCGSMRP 799
            ..::|..|..|..||..|::.|:|.:||.:.  ..|.::.|. |...|||:|...|.|||   |.
 Worm   523 RNLNGSKTLHEISADRFGVEAAWRTFKKLDL--SNESEIVGFQNFNIDQLYFRTAALIWC---RQ 582

  Fly   800 EDALTKIRSAV---HSPGFVRVLGPLSNSRDFASAYKCPLGSTMNPAEKCSVW 849
            .|. |.::.|:   |.....||.|..:|...||..:.|||||.|||.:||.::
 Worm   583 RDT-TDLQYALQREHPTNNFRVNGIYANMPQFAETFNCPLGSPMNPKKKCDLF 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep1NP_511056.2 M13 194..847 CDD:341056 164/675 (24%)
nep-3NP_494679.2 M13 82..631 CDD:341056 163/675 (24%)

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