DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep1 and nep-3

DIOPT Version :9

Sequence 1:NP_001284925.1 Gene:Nep1 / 31547 FlyBaseID:FBgn0029843 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_494679.2 Gene:nep-3 / 173730 WormBaseID:WBGene00016778 Length:634 Species:Caenorhabditis elegans


Alignment Length:768 Identity:182/768 - (23%)
Similarity:320/768 - (41%) Gaps:180/768 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LLVLAIAFTVL--------GAAIGALAIYFASVHQRCHLYRLEPDNDDRPNGRWNQDSGSAHEGQ 169
            :::||:...|:        ...||      ..|.:.|.                |..:.||....
 Worm    16 IIILAVPIIVILPLVLLLEAGKIG------GEVSENCS----------------NHSTSSASPKP 58

  Fly   170 DNICMTQECVRTAASLLSAMDLNSDPCEDFFQYACGTWNKMHPIPEDRSSISTFEVLSDQQQVIL 234
            ..:|:|.||:.....||:..|.:.||||:|:|.|||.:|:.:.|...|:        :.:||::.
 Worm    59 KPMCLTPECITLVHQLLNFQDPSVDPCENFYQAACGKYNEHNVIDGSRT--------AQKQQIVK 115

  Fly   235 RAVLEEPIDERDNKATIKA----KTFFKSCMDIPQIRKIGTGRLKQV----LQSLGGWPVIERNW 291
            |.:.:  ...::..:|.|:    |..::.|.:...|:.:|...|.|.    :|.:|.|||::.||
 Worm   116 RLIRD--FLHKNQSSTSKSENSMKLLYEKCKEAKTIKVLGNQNLLQEIFMNIQKIGSWPVLDENW 178

  Fly   292 SPPADLSVERLMGQLRLNYSEPVMIELYVGADDKNSSVNILQMDQLQYALPSRDYYLKESSANDR 356
            ........|.|:..:||..|.....|:.:.:|   :.|.|         .|:|::..:|:.::  
 Worm   179 DGKKFNLNEMLLSLIRLGVSNFGFFEIIISSD---AFVEI---------KPARNFPTRENLSD-- 229

  Fly   357 RAYHRYMTQVALLLGADPATAAAELEKVVLFETQLVNVSLPEADRHDTSLVYRKMLLPELQELVP 421
                 .:::|.|..|..|                  |::..|.|            |.|.:.|..
 Worm   230 -----IISKVFLGNGFQP------------------NITAIEND------------LREYENLQR 259

  Fly   422 EVQWQEYLQAALGPGIPLQEDEPLVTYGLHYLTEMGKILAHTDRRVVHNYMLWRLVMSLMSHMID 486
            |                              |..:.:::..|..|.:.||:::..:.|:|.    
 Worm   260 E------------------------------LKSLERLIQTTPNRSLVNYLIFNYLKSVML---- 290

  Fly   487 EYQRERVEFRKILMGIQSERTRWSQCVEWTNKKLGVAVGAL-------FIRDNFNQESKEVALEM 544
            ||:|...|                ||.       ||.:..|       |:::..::|:::....|
 Worm   291 EYKRLPEE----------------QCE-------GVVIDFLPRASTRVFVQNFLDKENRKYVAGM 332

  Fly   545 IHTIRAAFNELLAENDWMDDETRAVAKEKADSMNERIGYPELLTNATELEQEYVNLTI-VPDNFI 608
            |..::..|.:::.|:.|:::|::.||.:|..::...||||:.......|::.:.:|.| ..|::.
 Worm   333 IEDVKMGFIDMIQESTWLNEESKKVAVQKVKNIKSMIGYPDFFEPPGTLDRSFKDLNIEQTDSYH 397

  Fly   609 NNVLSILQWESEKMLRLLRQ--PVDKEKWTTEPAV-VNAFYNPNKNDIVFPAGILQPLFYSQHFP 670
            ..|..|.::.:|:.:..:..  |:|..    :|.: .||||. |.|.:...|.:|....:...||
 Worm   398 TIVRKIQKFTNEQCMEFVASEIPLDPR----QPILHANAFYQ-NTNFLAILAPVLDDPIFDTTFP 457

  Fly   671 KSLNYGGIGVVIGHEITHGFDDKGRQFDKEGNMMQWWNNATIEAFRERTQCVIDQYSRYKINEVD 735
            :.:|...||.|:.|||.|.||..|..:|..|....|......|.:.:|.:|::.|:..|...:..
 Worm   458 RYVNLAVIGNVLAHEIGHAFDHTGINYDDAGQQRIWLTPEDSEEYGKRLRCLLRQHDEYDDPDFG 522

  Fly   736 MFMDGRMTQGENIADNGGLKQAFRAYKKWETLHGREQQLPGL-NMTHDQLFFLNYAQIWCGSMRP 799
            ..::|..|..|..||..|::.|:|.:||.:.  ..|.::.|. |...|||:|...|.|||   |.
 Worm   523 RNLNGSKTLHEISADRFGVEAAWRTFKKLDL--SNESEIVGFQNFNIDQLYFRTAALIWC---RQ 582

  Fly   800 EDALTKIRSAV---HSPGFVRVLGPLSNSRDFASAYKCPLGSTMNPAEKCSVW 849
            .|. |.::.|:   |.....||.|..:|...||..:.|||||.|||.:||.::
 Worm   583 RDT-TDLQYALQREHPTNNFRVNGIYANMPQFAETFNCPLGSPMNPKKKCDLF 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep1NP_001284925.1 M13 194..847 CDD:189000 164/675 (24%)
nep-3NP_494679.2 M13 82..631 CDD:189000 163/675 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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