DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep1 and mme

DIOPT Version :9

Sequence 1:NP_001284925.1 Gene:Nep1 / 31547 FlyBaseID:FBgn0029843 Length:849 Species:Drosophila melanogaster
Sequence 2:XP_031758820.1 Gene:mme / 101734885 XenbaseID:XB-GENE-1011098 Length:746 Species:Xenopus tropicalis


Alignment Length:705 Identity:264/705 - (37%)
Similarity:401/705 - (56%) Gaps:30/705 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 DNICMTQECVRTAASLLSAMDLNSDPCEDFFQYACGTWNKMHPIPEDRSSISTFEVLSDQQQVIL 234
            |.||.:|.|:.|||.:::.||..:|||.||:|||||.|.|.:.||::....:||::|....:|:|
 Frog    47 DGICTSQACISTAARIIANMDAATDPCNDFYQYACGGWLKKNRIPDNNIVSNTFDILRTDIEVVL 111

  Fly   235 RAVLE-EPIDERDNKATIKAKTFFKSCMD--IPQIRKIGTGRLKQVLQSLGGWPVIERNWSPPAD 296
            :..|| |..|  |..|..|.|||:|||:|  |..:||  .|.|.:.|.:|..||:...||.....
 Frog   112 KDALEKESAD--DIPAIKKVKTFYKSCIDETIKNLRK--GGPLIKTLPALYDWPIAVDNWETRYG 172

  Fly   297 L--SVERLMGQLRLNYSEPVMIELYVGADDKNSSVNILQMDQLQYALPSRDYY-LKESSANDRRA 358
            |  |.:..:......|.:..:|.:||..|..|||..||.:||....|||:||| .|.:|.....|
 Frog   173 LVWSAQESIAGFITKYGQSGLINVYVSEDLTNSSTYILHIDQPGLGLPSKDYYDCKGTSEIACLA 237

  Fly   359 YHRYMTQVALL------LGADPATAAAELEKVVLFETQLVNVSLPEADRHDTSLVYRKMLLPELQ 417
            |...|..||:|      |..:.....:|:|||...|.::......|..|.:.:.:|:||.|..:.
 Frog   238 YMEQMVSVAMLIRKERNLTINEDKILSEMEKVFKLEREIAKAEASEEIRENLNDIYKKMTLSGIA 302

  Fly   418 ELVP------EVQWQEYLQAALGP-GIPLQEDEPLVTYGLHYLTEMGKILAHTDRRVVHNYMLWR 475
            :..|      .:.|.:.:.|.:.| |:.::|:|.:......||.:: :.|.....|.:.||:.||
 Frog   303 KTYPLKMNDQNINWLKLINAIISPGGVSIEENEQVALICSDYLKKL-RFLNKYKARELQNYLGWR 366

  Fly   476 LVMSLMSHMIDEYQRERVEFRKILMGIQSERTRWSQCVEWTNKKLGVAVGALFIRDNFNQESKEV 540
            .::|.::.:..||:...:..:|.|.|..:|.:.|..||.:.|..:..|:|.|::::..:.:.:.|
 Frog   367 YILSAINDLSLEYKNTGIHLKKALYGNAAEGSDWQTCVTYLNDNMEDAIGRLYLKETLSADIEHV 431

  Fly   541 AL-----EMIHTIRAAFNELLAENDWMDDETRAVAKEKADSMNERIGYPELLTNATELEQEYVNL 600
            .:     |:|..||.||.|:|.|.||||::|:..|..|..|:||||.:.|.:.:..:|.:.|..|
 Frog   432 KVKDKVKEIIAEIRRAFLEMLEEMDWMDEDTKKRAARKVASINERIAFSEDIMDDFKLNEGYSEL 496

  Fly   601 TIVPDNFINNVLSILQWESEKMLRLLRQPVDKEKWTTEPAVVNAFYNPNKNDIVFPAGILQPLFY 665
            ....|....|....:::..:||...||:.|:|.:|...||.|||||:...|:|||||||||..|:
 Frog   497 EFRVDELFENKQKYIEFVQKKMTSRLRKQVNKNEWVPGPAHVNAFYSLTYNEIVFPAGILQTPFF 561

  Fly   666 SQHFPKSLNYGGIGVVIGHEITHGFDDKGRQFDKEGNMMQWWNNATIEAFRERTQCVIDQYSRYK 730
            |...|.:|||||||::||||||||||::|..||:.||::.||.||::..|...:||.::||..|.
 Frog   562 SSSQPSALNYGGIGMIIGHEITHGFDNRGCNFDEHGNLVNWWTNASMMNFSNLSQCFVNQYGNYS 626

  Fly   731 INEV-DMFMDGRMTQGENIADNGGLKQAFRAYKKWETLHGREQQLPGLNMTHDQLFFLNYAQIWC 794
            .:|. ..:::|..|.||||:||||::.|:||:|.:...|..:..|||:::..|||||:::.||||
 Frog   627 WDEAGGQYLNGISTLGENISDNGGIRGAYRAFKNYVKSHKEDDLLPGIDLDSDQLFFISFGQIWC 691

  Fly   795 GSMRPEDALTKIRSAVHSPGFVRVLGPLSNSRDFASAYKCPLGSTMNPAEKCSVW 849
            |..|||.|.|.|::..|:||..||:|.|.||.:|:.|:.|...:.||||.||.:|
 Frog   692 GMHRPEYAATLIKTGSHTPGIFRVIGTLQNSPEFSKAFSCCNNAYMNPAVKCKLW 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep1NP_001284925.1 M13 194..847 CDD:189000 252/677 (37%)
mmeXP_031758820.1 M13 71..744 CDD:341056 252/677 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 564 1.000 Inparanoid score I1073
OMA 1 1.010 - - QHG61902
OrthoDB 1 1.010 - - D157132at33208
OrthoFinder 1 1.000 - - FOG0000538
OrthoInspector 1 1.000 - - otm49079
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2533
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.080

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