DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nep1 and mmel1

DIOPT Version :9

Sequence 1:NP_001284925.1 Gene:Nep1 / 31547 FlyBaseID:FBgn0029843 Length:849 Species:Drosophila melanogaster
Sequence 2:XP_012821551.1 Gene:mmel1 / 100145721 XenbaseID:XB-GENE-991673 Length:765 Species:Xenopus tropicalis


Alignment Length:696 Identity:284/696 - (40%)
Similarity:431/696 - (61%) Gaps:16/696 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 QDNICMTQECVRTAASLLSAMDLNSDPCEDFFQYACGTWNKMHPIPEDRSSISTFEVLSDQQQVI 233
            :::||.|..||..||.::..||...:||.||:|||||.|...|.|||..|..|.|::|.|:.::|
 Frog    71 KESICTTTGCVTAAARIIQNMDPTIEPCTDFYQYACGGWLNKHVIPETSSRYSIFDILRDEMEII 135

  Fly   234 LRAVLEEPIDERDNKATIKAKTFFKSCMDIPQIRKIGTGRLKQVLQSLGGWPVIERNW--SPPAD 296
            |:.:||.| |:.|..|..|||..:||||:...|.:..:..|.::|.::|.|||...:|  :..::
 Frog   136 LKGLLEMP-DQEDRDAFKKAKILYKSCMNESLIEQRDSLPLLELLTTVGEWPVASTDWNGTKESN 199

  Fly   297 LSVERLMGQLRLNYSEPVMIELYVGADDKNSSVNILQMDQLQYALPSRDYYL-KESSANDRRAYH 360
            .|:|..:..|...:::.|:::::|..||:.||.:|:.:||....:||||||. |.:....|.||.
 Frog   200 WSLEEKLSLLNYKFNKRVLVDIFVWNDDRESSKHIIYIDQPSLGMPSRDYYFNKGNYQRIREAYL 264

  Fly   361 RYMTQVALL------LGADPATAAAELEKVVLFETQLVNVSLPEADRHDTSLVYRKMLLPELQE- 418
            ::|..:|.:      |..|.:....|:.:|:..||.:...:.|..:|:|.:|:|.||.|.|.|: 
 Frog   265 QFMITIARMVREDRNLTRDDSLVQEEMTRVMDLETDIARATAPSEERNDVTLLYNKMTLLEFQQK 329

  Fly   419 -LVPEVQWQEYLQAALGP-GIPLQEDEPLVTYGLHYLTEMGKILAHTDRRVVHNYMLWRLVMSLM 481
             .:.:..|..::|..:.. .|.||.:|.:|.||..||.::..||::.....:.||::||:|:..:
 Frog   330 FALDDFNWTSFIQGVMSSVNIQLQAEEEVVVYGAPYLHQLKNILSNYSASTLQNYVVWRMVIDRV 394

  Fly   482 SHMIDEYQRERVEFRKILMGIQSERTRWSQCVEWTNKKLGVAVGALFIRDNFNQESKEVALEMIH 546
            |.:...|:..|..:||.|.|...|..||.:||.:.|..:..||||:::::.|..|||.:..::|:
 Frog   395 SSLSRRYKDARASYRKALYGTTLEEARWRECVSYVNSNMENAVGAMYVKETFAGESKRMISDLIN 459

  Fly   547 TIRAAFNELLAENDWMDDETRAVAKEKADSMNERIGYPE--LLTNATELEQEYVNLTIVPDNFIN 609
            .:|.||.|.|.|..|||:.::..|:|||.|:.|:||||:  |.....:|:||...|......:..
 Frog   460 KVREAFIETLDELQWMDETSKDKAREKALSIKEQIGYPDYILEDQNDKLDQETAALNFSEYQYFE 524

  Fly   610 NVLSILQWESEKMLRLLRQPVDKEKWTTEPAVVNAFYNPNKNDIVFPAGILQPLFYSQHFPKSLN 674
            |:|.||...::|.|:.||:|||::.|....||.:|||:||:|.||||||||||.|:::|.|::||
 Frog   525 NILEILNSGAQKSLKKLREPVDQDAWIIGAAVADAFYSPNRNQIVFPAGILQPPFFNKHQPQALN 589

  Fly   675 YGGIGVVIGHEITHGFDDKGRQFDKEGNMMQWWNNATIEAFRERTQCVIDQYSRYKINEV-DMFM 738
            :||||:||||||||||||.||.|||:|||..||:|.:...|:::::|::.||..|..... ...:
 Frog   590 FGGIGMVIGHEITHGFDDNGRNFDKDGNMFDWWSNFSAMHFKDQSRCMVYQYGNYTWELAGGQNV 654

  Fly   739 DGRMTQGENIADNGGLKQAFRAYKKWETLHGREQQLPGLNMTHDQLFFLNYAQIWCGSMRPEDAL 803
            .|.:|.|||||||||::||::||.||...||:|.:||||::|:.||||||:||:||||.|||.|.
 Frog   655 SGIITLGENIADNGGVRQAYKAYLKWVERHGKEPKLPGLDLTYKQLFFLNFAQVWCGSYRPEYAR 719

  Fly   804 TKIRSAVHSPGFVRVLGPLSNSRDFASAYKCPLGSTMNPAEKCSVW 849
            ..|::.||||...||:|.|.|...||..:.|..|:.|:|.|||.||
 Frog   720 HSIKTDVHSPFKYRVMGSLQNFEAFAEEFNCKKGTKMHPVEKCRVW 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep1NP_001284925.1 M13 194..847 CDD:189000 272/667 (41%)
mmel1XP_012821551.1 M13 95..763 CDD:341056 272/668 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 253 1.000 Domainoid score I2026
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 564 1.000 Inparanoid score I1073
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D157132at33208
OrthoFinder 1 1.000 - - FOG0000538
OrthoInspector 1 1.000 - - otm49079
Panther 1 1.100 - - O PTHR11733
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3535
SonicParanoid 1 1.000 - - X2533
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

Return to query results.
Submit another query.