DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment raptor and RAPTOR1

DIOPT Version :10

Sequence 1:NP_572294.2 Gene:raptor / 31543 FlyBaseID:FBgn0029840 Length:1621 Species:Drosophila melanogaster
Sequence 2:NP_566335.1 Gene:RAPTOR1 / 820032 AraportID:AT3G08850 Length:1344 Species:Arabidopsis thaliana


Alignment Length:1476 Identity:544/1476 - (36%)
Similarity:762/1476 - (51%) Gaps:303/1476 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 WRIRERMKTASVALVLCLNIGVDPPDVVKIQPCSRLECWIDPSSVSPPKAMELIGSNLQMQYERW 272
            ||::|||||..|||||||||.||||||:||.||:|:|.||||.|::||||:|.||.||..|||||
plant    98 WRLKERMKTGCVALVLCLNITVDPPDVIKISPCARIEAWIDPFSMAPPKALETIGKNLSTQYERW 162

  Fly   273 QPRARYKKCNDPTVDDVKKLCTSLRRNAKGERILFHYNGHGVPKPTANGEIWVFNKTFTQYIPLS 337
            |||||||...|||||:|:|||.:.|:.||.||:|||||||||||||||||||||||::||||||.
plant   163 QPRARYKVQLDPTVDEVRKLCLTCRKYAKTERVLFHYNGHGVPKPTANGEIWVFNKSYTQYIPLP 227

  Fly   338 IFELITWMSAPSIYVYDCSNAGIIINSFQPYAKQHEEELGKALAAAQQRGGVQQLVGGSGGAANV 402
            |.||.:|:..|||||:|||.|.:|:|:|   |:.|:                    .||.|::. 
plant   228 ISELDSWLKTPSIYVFDCSAARMILNAF---AELHD--------------------WGSSGSSG- 268

  Fly   403 AANQVQLTNQMVSYKNCIHLAACAANEILPMNAQLPADLFTSCLTTPINIALKWYAMQEKLGMVP 467
                        |.::||.||||..:|.||.:.:.|||:|||||||||.:||||:..:..|..: 
plant   269 ------------SSRDCILLAACDVHETLPQSVEFPADVFTSCLTTPIKMALKWFCRRSLLKEI- 320

  Fly   468 RIQSELIDKIPGKVNDRRTMMGELNWIFTAITDTIAWNTLPRELFQRLFRQDLLVASLFRNFLLA 532
             |...|||:|||:.|||:|::|||||||||:|||||||.||.|||||||||||||||||||||||
plant   321 -IDESLIDRIPGRQNDRKTLLGELNWIFTAVTDTIAWNVLPHELFQRLFRQDLLVASLFRNFLLA 384

  Fly   533 ERILRSHDCTPVSLPALPPCYRHPMWKAWDLVVDLALQQLPE-ILDHNAPYRQLPFFEHQLTAFQ 596
            |||:||.:|.|:|.|.|||.::|.||.|||:..::.|.|||: :||.:..::..|||..|||||:
plant   385 ERIMRSANCNPISHPMLPPTHQHHMWDAWDMAAEICLSQLPQLVLDPSTEFQPSPFFTEQLTAFE 449

  Fly   597 VWLDSESESRTPPEQLPIVLQVLLSQVHRLRALELLARFLDLGPWAVNLALGVGIFPYVLKLLQS 661
            ||||..||.:.|||||||||||||||.||.|||.||.||||:|.|||:|||.||||||||||||:
plant   450 VWLDHGSEHKKPPEQLPIVLQVLLSQCHRFRALVLLGRFLDMGSWAVDLALSVGIFPYVLKLLQT 514

  Fly   662 STRELRPVLVFIWAKILAVDPSCQVDLVKE--YKYFLSVLQDTSVSKEHRTLSAFVLSSIVHNFL 724
            :|.|||.:|||||.||||:|.|||:||||:  :.||:..|..:....|.|.::||||:.||....
plant   515 TTNELRQILVFIWTKILALDKSCQIDLVKDGGHTYFIRFLDSSGAFPEQRAMAAFVLAVIVDGHR 579

  Fly   725 LGQTSALQGPLLSICLEQLN-------DGSWLLRQWLAICLGMLWQNFEKARWSGARDLAHEKLY 782
            .||.:.|:..|:.:||..|.       ....|..|||.:|||.||::|.:|:..|....|.|||.
plant   580 RGQEACLEANLIGVCLGHLEASRPSDPQPEPLFLQWLCLCLGKLWEDFMEAQIMGREANAFEKLA 644

  Fly   783 VLLRDSIPEVRAAAVFALGTFISSVTDRS----EEQANNIDRIIA----ITMLETVGEDMSPLVR 839
            .||.:..|||||||||||||.:....|.:    |::.::.::|.|    |..|..|..|.|||||
plant   645 PLLSEPQPEVRAAAVFALGTLLDIGFDSNKSVVEDEFDDDEKIRAEDAIIKSLLDVVSDGSPLVR 709

  Fly   840 MELAAALQWMVVLFESQFVAVYLTEHMRGHVSAASFVMCPDPRDLTSSTHSLER----------- 893
            .|:|.||        ::| |....:|::  ::|||: ..|....|.:|..|:.:           
plant   710 AEVAVAL--------ARF-AFGHKQHLK--LAAASY-WKPQSSSLLTSLPSIAKFHDPGSATIVS 762

  Fly   894 -HVTIRRGASSSSISNMGGASISSG-TGSS----SNPLGRSKSGSGSSGGRGAAGAAGGTNS--I 950
             |::....||:.|......:.|||. .|||    .:||....|....||....:.:.|..:.  :
plant   763 LHMSPLTRASTDSQPVARESRISSSPLGSSGLMQGSPLSDDSSLHSDSGMMHDSVSNGAVHQPRL 827

  Fly   951 PFQSIFTKLWLGICNLAQDPFPRVAAIAQEIVEHVRDTALCPIMAAKEATMANASEKCSSLSVSL 1015
            ...:::::....:..||:||.||:|::.:.::.         |:..::.             |:.
plant   828 LDNAVYSQCVRAMFALAKDPSPRIASLGRRVLS---------IIGIEQV-------------VAK 870

  Fly  1016 PPSPNTRVNYLGGGGAPGGAGATAESPPVGAAASGASHWAQKLRLSGSGACMGAGDPQTILQRKL 1080
            |..|.         |.||.|..|:.:|..|.|.|  |.|..          |.||:    |....
plant   871 PSKPT---------GRPGEAATTSHTPLAGLARS--SSWFD----------MHAGN----LPLSF 910

  Fly  1081 RTSSINDETDSGPGYSRGVAGAGT------GLGLP-SGPRESTHSARSSGSESNHYLEPGHSLTP 1138
            ||..::....:   |..|:....:      .||.| ||..:....|  ||||        .||.|
plant   911 RTPPVSPPRTN---YLSGLRRVCSLEFRPHLLGSPDSGLADPLLGA--SGSE--------RSLLP 962

  Fly  1139 IVLTEFIPWAISYFTRP--GKERYSSAEGSAEEGRQRFPVDRNSAELRRRRLRFLRNDFVRRHAG 1201
              |:....|:..:|::|  |....|....:..|.:::|.:: :.|:.:...:..|.|:       
plant   963 --LSTIYGWSCGHFSKPLLGGADASQEIAAKREEKEKFALE-HIAKCQHSSISKLNNN------- 1017

  Fly  1202 RKHQELIDPYGFDVCVWNRKTQFTPSIVKLLPYEPQIAVA-YREKVLVYDFQYNSVRTYGAESLG 1265
                        .:..|:.:.:.......|.|:.|.:..| ..|::.|::::             
plant  1018 ------------PIANWDTRFETGTKTALLHPFSPIVVAADENERIRVWNYE------------- 1057

  Fly  1266 GNFTGYSSGYGSGSGSSSSLNG----STPRKSGAHTSGGGGGGFSAAPFARVSSIEFINAQDMAL 1326
                           .::.|||    ..|.|.                   :|.:..||..|.:|
plant  1058 ---------------EATLLNGFDNHDFPDKG-------------------ISKLCLINELDDSL 1088

  Fly  1327 NLVAHEDGVVRVWQSSPPASSATSEDTPSKARLVTAWTALGQVNQHNHRQRSVASGGSIGKGADA 1391
            .|||..||.||:|::..         |..|.:|||.:::   :..|....|.:            
plant  1089 LLVASCDGSVRIWKNYA---------TKGKQKLVTGFSS---IQGHKPGARDL------------ 1129

  Fly  1392 SGLSSAAIGSGGIVTAWQQCSQHLVIGGGGCRFIRIWDVERELKLADIPLGRSETCARVLSPYLP 1456
                       ..|..|||.|.:| ...|....:.:||:|:|..:..:|   ||:...|.:....
plant  1130 -----------NAVVDWQQQSGYL-YASGETSTVTLWDLEKEQLVRSVP---SESECGVTALSAS 1179

  Fly  1457 NMRSDVILAGCDDGSVRLFDKRCAPQDAGISVYRRHSAPILHASL------RANGL--------- 1506
            .:....:.||..|||:||:|.| :|:            |::.|:.      |..||         
plant  1180 QVHGGQLAAGFADGSLRLYDVR-SPE------------PLVCATRPHQKVERVVGLSFQPGLDPA 1231

  Fly  1507 VLVSGCTEGRISVADMRGSQSSINPFDVVYEWDAGGDVTAITSHQLEDTVACGNASKIV-IYSLD 1570
            .:||....|.|...|:|.::.:....|.     ..|.:||:..|:....:|.|:|.::: ::||.
plant  1232 KVVSASQAGDIQFLDLRTTRDTYLTIDA-----HRGSLTALAVHRHAPIIASGSAKQLIKVFSLQ 1291

  Fly  1571 GRQQKVLRTNEGFIGPKIGHPTYLYFHPYKAQLAVGFVDNTVAIYS 1616
            |.|..::|....|:..|||..:.|.||||:..||.|..|:.|:||:
plant  1292 GEQLGIIRYYPSFMAQKIGSVSCLTFHPYQVLLAAGAADSFVSIYT 1337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
raptorNP_572294.2 Raptor_N 214..365 CDD:464202 108/150 (72%)
HEAT repeat 612..634 CDD:293787 18/21 (86%)
HEAT repeat 646..684 CDD:293787 28/37 (76%)
HEAT repeat 694..724 CDD:293787 11/29 (38%)
HEAT <725..846 CDD:441023 53/135 (39%)
HEAT repeat 734..760 CDD:293787 10/32 (31%)
HEAT repeat 774..803 CDD:293787 18/28 (64%)
HEAT repeat 822..848 CDD:293787 14/29 (48%)
WD40 1400..>1617 CDD:475233 65/233 (28%)
WD40 repeat 1448..1489 CDD:293791 11/40 (28%)
WD40 repeat 1496..1539 CDD:293791 11/57 (19%)
WD40 repeat 1544..1581 CDD:293791 11/37 (30%)
WD40 repeat 1588..1615 CDD:293791 12/26 (46%)
RAPTOR1NP_566335.1 Raptor_N 104..255 CDD:464202 108/150 (72%)
HEAT 635..>719 CDD:441023 36/91 (40%)
HEAT repeat 640..667 CDD:293787 18/26 (69%)
HEAT repeat 692..720 CDD:293787 14/36 (39%)
WD40 repeat 1030..1067 CDD:293791 9/64 (14%)
WD40 1035..1336 CDD:475233 94/404 (23%)
WD40 repeat 1127..1167 CDD:293791 13/66 (20%)
WD40 repeat 1173..1212 CDD:293791 13/51 (25%)
WD40 repeat 1220..1257 CDD:293791 8/36 (22%)
WD40 repeat 1264..1305 CDD:293791 11/40 (28%)

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