DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment raptor and Rptor

DIOPT Version :9

Sequence 1:NP_001284924.1 Gene:raptor / 31543 FlyBaseID:FBgn0029840 Length:1621 Species:Drosophila melanogaster
Sequence 2:NP_001127971.2 Gene:Rptor / 287871 RGDID:1311784 Length:1335 Species:Rattus norvegicus


Alignment Length:1503 Identity:640/1503 - (42%)
Similarity:857/1503 - (57%) Gaps:260/1503 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 IRDDRCPLSLQTKRHKERIQAMMYERQPWRIRERMKTASVALVLCLNIGVDPPDVVKIQPCSRLE 244
            :.|...||:...|||.|:|:......|.||:::||||.|||||||||:|||||||||..||:|||
  Rat    21 LTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSVALVLCLNVGVDPPDVVKTTPCARLE 85

  Fly   245 CWIDPSSVSPPKAMELIGSNLQMQYERWQPRARYKKCNDPTVDDVKKLCTSLRRNAKGERILFHY 309
            |||||.|:.|.||:|.||:|||.|||.||||||||:..|||||:|||||||||||||.||:||||
  Rat    86 CWIDPLSMGPQKALETIGANLQKQYENWQPRARYKQSLDPTVDEVKKLCTSLRRNAKEERVLFHY 150

  Fly   310 NGHGVPKPTANGEIWVFNKTFTQYIPLSIFELITWMSAPSIYVYDCSNAGIIINSFQPYAKQHEE 374
            ||||||:||.|||:|||||.:||||||||::|.|||.:|||:||||||||:|:.||:.:|.|.|:
  Rat   151 NGHGVPRPTVNGEVWVFNKNYTQYIPLSIYDLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQ 215

  Fly   375 ELGKALAAAQQRGGVQQLVGGSGGAANVAANQVQLTNQM---VSYKNCIHLAACAANEILPMNAQ 436
            ||..|                       |.|......||   .|.||||.||||.|:|:|||...
  Rat   216 ELEVA-----------------------AINPNHPLAQMPLPPSMKNCIQLAACEAHELLPMIPD 257

  Fly   437 LPADLFTSCLTTPINIALKWYAMQEKLGMVPRIQSELIDKIPGKVNDRRTMMGELNWIFTAITDT 501
            ||||||||||||||.|||:|:.||:.:.:||.:..:||:||||::|||||.:|||||||||||||
  Rat   258 LPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPGRLNDRRTPLGELNWIFTAITDT 322

  Fly   502 IAWNTLPRELFQRLFRQDLLVASLFRNFLLAERILRSHDCTPVSLPALPPCYRHPMWKAWDLVVD 566
            ||||.|||:|||:|||||||||||||||||||||:||::|||||.|.|||.|.|.||:||||.||
  Rat   323 IAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSYNCTPVSSPRLPPTYMHAMWQAWDLAVD 387

  Fly   567 LALQQLPEILDHNAPYRQLPFFEHQLTAFQVWLDSESESRTPPEQLPIVLQVLLSQVHRLRALEL 631
            :.|.|||.|::....:|..|||..|||||||||....|:|:||||||||||||||||||||||:|
  Rat   388 ICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWLTMGVENRSPPEQLPIVLQVLLSQVHRLRALDL 452

  Fly   632 LARFLDLGPWAVNLALGVGIFPYVLKLLQSSTRELRPVLVFIWAKILAVDPSCQVDLVKE--YKY 694
            |.||||||||||:|||.||||||||||||||.|||||:||||||||||||.|||.||||:  :||
  Rat   453 LGRFLDLGPWAVSLALSVGIFPYVLKLLQSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKY 517

  Fly   695 FLSVLQDTSVSKEHRTLSAFVLSSIVHNFLLGQTSALQGPLLSICLEQLNDGSWLLRQWLAICLG 759
            |||||.|..:..||||::||:|:.||:::..||.:.|||.|::||||||:|...|||||:|||||
  Rat   518 FLSVLADPYMPAEHRTMTAFILAVIVNSYTTGQEACLQGNLIAICLEQLSDPHPLLRQWVAICLG 582

  Fly   760 MLWQNFEKARWSGARDLAHEKLYVLLRDSIPEVRAAAVFALGTFISSVTDRSEEQANNIDRIIAI 824
            .:||||:.|||.|.||.||||||.||.|.|||||.|||||||||:.:..:|: :.:..||..:|:
  Rat   583 RIWQNFDSARWCGVRDSAHEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERT-DHSTTIDHNVAM 646

  Fly   825 TMLETVGEDMSPLVRMELAAALQWMVVLFESQF--VAVYLTEHMRGH-------VSAASFVMCPD 880
             ||..:..|.||:||.||..||..:||.:||.|  ||:...|..:.:       ....|.....|
  Rat   647 -MLAQLINDGSPMVRKELVVALSHLVVQYESNFCTVALQFMEEEKNYPLPSPAATEGGSLTPVRD 710

  Fly   881 ----PRDLTSSTHSLERHVTIRRGASSS----SISNMGGASISSGTGSSSNPLGRSKSGSGSSGG 937
                ||..:.|::...|.||..|..:.|    |::...|:|::...|:    |..|.|.|.:.|.
  Rat   711 SPCTPRLRSVSSYGNIRAVTTARNLNKSLQNLSLTEESGSSVAFSPGN----LSTSSSASSTLGS 771

  Fly   938 R------------------GAAGAAGGTNSIPFQSIFTKLWLGICNLAQDPFPRVAAIAQEIVEH 984
            .                  .:..|......:.|.|::|::|..:.:||.||:|.|:.:|.:::..
  Rat   772 PENEEYILSFETIDKMRRVSSYSALNSLIGVSFNSVYTQIWRVLLHLAADPYPDVSDLAMKVLNS 836

  Fly   985 VRDTALCPIMAAKEATMANASEK----CSSLSVSLPPSPNTR---VNYLGGGGAPGGAGATAESP 1042
            :          |.:||: ||..:    .|||:.|.|.||..:   ::.:||            ||
  Rat   837 I----------AYKATV-NARPQRILDTSSLTQSAPASPTNKGMHIHQVGG------------SP 878

  Fly  1043 PVGAAASGASHWAQKLRLSGSGACMGAGD--PQTILQRKLRTSSINDETDSGPGYSRGVAGA--- 1102
            |.                |.:.:|....|  .||:.:         |...|.|| :.|..||   
  Rat   879 PA----------------SSTSSCSLTNDVAKQTVSR---------DLPSSRPG-TAGPTGAQYT 917

  Fly  1103 -------GTGLGLPSGPRESTHSARSSGSESNHYLEPGHS--LTPIVLTEFIPWAISYFTRPGKE 1158
                   .|......||.::|..|..:.         ||.  :...:.|.|..|:..||.:|   
  Rat   918 PHSHQFPRTRKMFDKGPDQTTDDADDAA---------GHKSFICATMQTGFCDWSARYFAQP--- 970

  Fly  1159 RYSSAEGSAEEGRQRFPVDRN-SAELRR-RRLRFLRNDFVRRHAGRKHQELIDPYGFDVCVWNRK 1221
                        ..:.|.:.: .:::|: |..|||||..||:.|.:..|:.|.  ..|..::..:
  Rat   971 ------------VMKIPEEHDLESQIRKEREWRFLRNTRVRKQAQQVIQKGIT--RLDDQIFLNR 1021

  Fly  1222 TQFTPSIVKLLPYEPQIAVAYREKVLVYDFQYNSVRTYGAESLGGNFTGYSSGYGSGSGSSSSLN 1286
            ....||:||..|:.|.||||.::.:..:|::......|                         .:
  Rat  1022 NPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDY-------------------------FH 1061

  Fly  1287 GSTPRKSGAHTSGGGGGGFSAAPFARVSSIEFINAQDMALNLVAHEDGVVRVWQSSPPASSATSE 1351
            ...||                  :.||:::|::|.||.:|.|.|.:||.:|||:     :.|..|
  Rat  1062 NGNPR------------------YTRVTAMEYLNGQDCSLLLTATDDGAIRVWK-----NFADLE 1103

  Fly  1352 DTPSKARLVTAWTALGQVNQHNHRQRSVASGGSIGKGADASGLSSAAIGSGGIVTAWQQCSQHLV 1416
            ..|   .:||||..|..:....             :||             |:|..|:| ...|:
  Rat  1104 KNP---EMVTAWQGLSDMLPTT-------------RGA-------------GMVVDWEQ-ETGLL 1138

  Fly  1417 IGGGGCRFIRIWDVERELKLADIPLGRSETCARVLSPYLPNMRSDVILAGCDDGSVRLFDKRCAP 1481
            :..|..|.:||||.:||.|:.|||.| :::|...||  ..:.|| :|:||..|||:|::|:|.|.
  Rat  1139 MSSGDVRIVRIWDTDRETKVQDIPTG-ADSCVTSLS--CDSHRS-LIVAGLGDGSIRVYDRRMAL 1199

  Fly  1482 QDAGISVYRRHSAPILHASLRAN--GLVLVSGCTEGRISVADMRGSQSSINPFDVVYEWDAGGDV 1544
            .:..:..||.|:|.::.|.|:.:  |.: ||....|.:...|.| ...|:|...:|      ..:
  Rat  1200 SECRVMTYREHTAWVVKAYLQKHPEGHI-VSVSVNGDVRFFDPR-MPESVNVMQIV------KGL 1256

  Fly  1545 TAITSHQLEDTVACGNASKI-VIYSLDGRQQKVLRTNEGFIGPKIGHPTYLYFHPYKAQLAVGFV 1608
            ||:..|...:.:|||:.::. .||:.:|.....::..:||:|.::|..:.|.|||:...||||..
  Rat  1257 TALDIHPQANLIACGSMNQFTAIYNGNGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGSN 1321

  Fly  1609 DNTVAIYS 1616
            |..:::||
  Rat  1322 DYYISVYS 1329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
raptorNP_001284924.1 Raptor_N 219..365 CDD:291222 112/145 (77%)
HEAT repeat 612..634 CDD:293787 20/21 (95%)
HEAT repeat 646..684 CDD:293787 33/37 (89%)
HEAT repeat 694..724 CDD:293787 16/29 (55%)
HEAT repeat 734..760 CDD:293787 17/25 (68%)
HEAT_2 743..847 CDD:290374 59/103 (57%)
HEAT repeat 774..803 CDD:293787 23/28 (82%)
HEAT repeat 822..848 CDD:293787 12/25 (48%)
WD40 <1296..1617 CDD:225201 96/324 (30%)
WD40 1400..>1617 CDD:295369 72/220 (33%)
WD40 repeat 1448..1489 CDD:293791 14/40 (35%)
WD40 repeat 1496..1539 CDD:293791 11/44 (25%)
WD40 repeat 1544..1581 CDD:293791 9/37 (24%)
WD40 repeat 1588..1615 CDD:293791 10/26 (38%)
RptorNP_001127971.2 Raptor_N 55..206 CDD:405260 116/150 (77%)
COG5096 472..>696 CDD:227427 132/225 (59%)
HEAT repeat 516..544 CDD:293787 16/27 (59%)
HEAT repeat 557..587 CDD:293787 19/29 (66%)
HEAT_2 566..668 CDD:404525 59/103 (57%)
HEAT repeat 599..625 CDD:293787 20/25 (80%)
HEAT repeat 640..670 CDD:293787 14/30 (47%)
WD40 1027..1322 CDD:421866 106/384 (28%)
WD40 repeat 1027..1063 CDD:293791 11/60 (18%)
WD40 repeat 1069..1121 CDD:293791 22/59 (37%)
WD40 repeat 1126..1162 CDD:293791 15/36 (42%)
WD40 repeat 1170..1207 CDD:293791 14/39 (36%)
WD40 repeat 1256..1297 CDD:293791 10/40 (25%)
WD40 repeat 1304..1328 CDD:293791 9/23 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354462
Domainoid 1 1.000 265 1.000 Domainoid score I1840
eggNOG 1 0.900 - - E1_KOG1517
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H80210
Inparanoid 1 1.050 1029 1.000 Inparanoid score I258
OMA 1 1.010 - - QHG55294
OrthoDB 1 1.010 - - D29632at33208
OrthoFinder 1 1.000 - - FOG0004448
OrthoInspector 1 1.000 - - oto97242
orthoMCL 1 0.900 - - OOG6_101923
Panther 1 1.100 - - LDO PTHR12848
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3153
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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