DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4660 and Them6

DIOPT Version :9

Sequence 1:NP_572293.1 Gene:CG4660 / 31542 FlyBaseID:FBgn0029839 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_941009.1 Gene:Them6 / 223626 MGIID:1925301 Length:207 Species:Mus musculus


Alignment Length:260 Identity:72/260 - (27%)
Similarity:105/260 - (40%) Gaps:64/260 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEQLCYLALSVLLAIIVVYGLLELHYFLRMCLCVLLARFVKRRCH-ILDTTTVNGLCLTNDVDTL 64
            |.:|...:||:.||.   :.||:..|.:|:...||.||.::.|.. :|......|..|.:|:| |
Mouse     1 MLELLVASLSLALAF---FALLDGWYLVRVPCAVLRARLLQPRVRDLLAEQRYAGRVLPSDLD-L 61

  Fly    65 LYHMNNARYFRELDFARVDFYERTNLYRTITGMGGSVFQGAATIRYRRFIRPFHRFNIISRIIYW 129
            |.|||||||.||.|.||.....|..:...:..:.......|:..||||.:|.|..|.:.:|:..|
Mouse    62 LLHMNNARYLREADVARAAHLTRCGVLGALRDLNAHTVLAASCARYRRSLRLFEPFEVHTRLQGW 126

  Fly   130 DEQSLFMEHRFVRPSDKFVHCIAICRQRVIDVSMEAVMSELLPRTSSNGFRATVLTSLAAPSPAA 194
            |:::.::|.|||...|.||..:...||.|:..|.:.|:..|..|...                  
Mouse   127 DDRAFYLEARFVSLRDGFVCALLRFRQHVLGTSPDRVVQHLCKRRVE------------------ 173

  Fly   195 GGISNPAMDTSLAENGHGTTSGGAAGTGATASATAAHCLKLKPSLPPELAKWIEYNDMSSKNLRS 259
                                                     .|.||.:|..||.||:.||:.||:
Mouse   174 -----------------------------------------PPELPEDLKHWISYNETSSQLLRA 197

  Fly   260  259
            Mouse   198  197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4660NP_572293.1 4HBT_2 56..162 CDD:290018 39/105 (37%)
Them6NP_941009.1 4HBT_2 54..185 CDD:315859 47/190 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837928
Domainoid 1 1.000 90 1.000 Domainoid score I7761
eggNOG 1 0.900 - - E1_KOG4366
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 117 1.000 Inparanoid score I4796
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59462
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003421
OrthoInspector 1 1.000 - - otm42667
orthoMCL 1 0.900 - - OOG6_106004
Panther 1 1.100 - - LDO PTHR12475
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4781
SonicParanoid 1 1.000 - - X2773
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

Return to query results.
Submit another query.