DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4660 and si:ch73-52e5.2

DIOPT Version :10

Sequence 1:NP_572293.1 Gene:CG4660 / 31542 FlyBaseID:FBgn0029839 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_001116101.1 Gene:si:ch73-52e5.2 / 100142654 ZFINID:ZDB-GENE-070912-341 Length:202 Species:Danio rerio


Alignment Length:256 Identity:72/256 - (28%)
Similarity:105/256 - (41%) Gaps:65/256 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LCYLALSVLLAIIVVYGLLELHYFLRMCLCVLLARFVKRRCHILDTTTVNGLCLTNDVDTLLYHM 68
            |.:|:.|:||     :|..::.||||.....|...|......:|....|:|..|.:|:| .:.||
Zfish     3 LWFLSGSLLL-----FGTFDVWYFLRGLWVALRCCFQSPIRDVLAEQVVHGRVLLHDMD-FMCHM 61

  Fly    69 NNARYFRELDFARVDFYERTNLYRTITGMGGSVFQGAATIRYRRFIRPFHRFNIISRIIYWDEQS 133
            |||||.||.||||.....|..|:.....:..::..||.||||||.:.....|.:.:||:.|||:|
Zfish    62 NNARYLRECDFARFAHGTRIGLFMAARALKATMVVGATTIRYRRSLALGEGFELRTRIVSWDEKS 126

  Fly   134 LFMEHRFVRPSDKFVHCIAICRQRVIDVSMEAVMSELLPRTSSNGFRATVLTSLAAPSPAAGGIS 198
            .::|.|||..||.|:..:.:|||.||..|.:.::..|..|                         
Zfish   127 FYLEQRFVSKSDGFISAVMLCRQNVIRGSPQNILEFLCKR------------------------- 166

  Fly   199 NPAMDTSLAENGHGTTSGGAAGTGATASATAAHCLKLKPSLPPELAKWIEYNDMSSKNLRS 259
                                          ...|    |.:..:|..||.:...||:.||:
Zfish   167 ------------------------------KVDC----PDISEDLQHWIRFISASSQALRA 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4660NP_572293.1 4HBT_2 56..162 CDD:463826 45/105 (43%)
si:ch73-52e5.2NP_001116101.1 4HBT_2 50..181 CDD:463826 51/190 (27%)

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