DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and Tspan17

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:XP_006517477.1 Gene:Tspan17 / 74257 MGIID:1921507 Length:281 Species:Mus musculus


Alignment Length:285 Identity:72/285 - (25%)
Similarity:115/285 - (40%) Gaps:40/285 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CIRRTFCW-LNIILWLCSCAFLGAGLWL--RLSYAGYATLLPQHAGLSADTIFMGIGGTGFVVSF 69
            |..:.|.: .||:.|:....||..|||.  ........:.|....||....:|:.:||...|:.|
Mouse    15 CCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVMSVLGF 79

  Fly    70 FGCCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYNSSDRGS 134
            .||.||..::..||..:.:.:.::|..|...|.:||:|:..:...|...:...::.:.:..|..:
Mouse    80 AGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKDWIRDQLNLFINNNVKAYRDDLDLQN 144

  Fly   135 LVAPSVASIWDSVQQSFECCGVSSYEDW--------YDIQSWPGRRWVPESCCRTLYDQRQVLTE 191
            |:        |..|:.:.|||.....||        .|:.....|..||.|||          ..
Mouse   145 LI--------DFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCC----------VR 191

  Fly   192 GSGDGMMRPDCG-------RSENPSLWWDKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITS 249
            ...:.::...||       ..|.....:.|||....:.|....|.||..|.:|||.:|:|||..:
Mouse   192 DPAEDVLNTQCGYDIRLKLELEQQGSIYTKGCVGQFEKWLQDNLIVVAGVLVGIALLQIFGLCLA 256

  Fly   250 MLLFCTVKHKRASDTYKS----YSP 270
            ..|...:|..:|:.:..|    |||
Mouse   257 QNLVSDIKAVKANWSLLSQTSPYSP 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 65/262 (25%)
NET-5_like_LEL 105..228 CDD:239418 26/137 (19%)
Tspan17XP_006517477.1 Tetraspanin 18..260 CDD:459767 64/259 (25%)
TM4SF9_like_LEL 115..235 CDD:239412 26/137 (19%)

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