DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and TSPAN6

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_003261.1 Gene:TSPAN6 / 7105 HGNCID:11858 Length:245 Species:Homo sapiens


Alignment Length:248 Identity:59/248 - (23%)
Similarity:105/248 - (42%) Gaps:30/248 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 TCIRRTFCWLNIILWLCSCAFLGAGLWLRLSYAGYATLLPQHAGLSADTIFMGIGGTGFVVSFFG 71
            ||.:........|.|:.....|..|:|.::|...|.:||.:.| .:...:.:..|....::..||
Human    15 TCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKA-TNVPFVLIATGTVIILLGTFG 78

  Fly    72 CCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYNSSDRGSLV 136
            |......|..:|.||.|.:.::|:.|.:...:.|:||..:..:..|.....: :.|||:  |...
Human    79 CFATCRASAWMLKLYAMFLTLVFLVELVAAIVGFVFRHEIKNSFKNNYEKAL-KQYNST--GDYR 140

  Fly   137 APSVASIWDSVQQSFECCGVSSYEDWYDIQSWPGRRWVPESCCRTLYDQRQVLTEGSGDGMMRPD 201
            :.:|    |.:|.:..||||:.|.||.| .::...:..|:|||:.                  .|
Human   141 SHAV----DKIQNTLHCCGVTDYRDWTD-TNYYSEKGFPKSCCKL------------------ED 182

  Fly   202 CGRSENPSLWWDKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLFC 254
            |....:.....::||...:.:....::.||..:..|:|..||.|:   .|.:|
Human   183 CTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGI---FLAYC 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 56/244 (23%)
NET-5_like_LEL 105..228 CDD:239418 27/122 (22%)
TSPAN6NP_003261.1 Tetraspanin 17..235 CDD:459767 57/246 (23%)
TM4SF2_6_like_LEL 112..209 CDD:239414 27/122 (22%)

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