DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp5D and Tspan15

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_932113.2 Gene:Tspan15 / 70423 MGIID:1917673 Length:294 Species:Mus musculus


Alignment Length:264 Identity:70/264 - (26%)
Similarity:114/264 - (43%) Gaps:29/264 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CIRRTFCWL-------NIILWLCSCAFLGAGLWLRLSYAGYATLLPQHAGLSADTIFMGIGGTGF 65
            |.|.::.||       :.:.||.....|..|::.......|.||  :.|.|:...|.:.:|...|
Mouse    12 CARFSYLWLKFSLIIYSTVFWLIGGLVLSVGIYAEAERQKYKTL--ESAFLAPAIILILLGVVMF 74

  Fly    66 VVSFFGCCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYNSS 130
            :|||.|...:...:.|||..:..::.:..:.|.:.|.:|.:||......|.:.:|.|||.:|:..
Mouse    75 IVSFIGVLASLRDNLCLLQSFMYILGICLVMELIGGIVALIFRNQTIDFLNDNIRRGIENYYDDL 139

  Fly   131 DRGSLVAPSVASIWDSVQQSFECCGVSSYEDW----YDIQSWPG--RRWVPESCC-RTLYDQRQV 188
            |        ..:|.|.||:.|:|||...|.||    |...|.||  ...||.:|| |...|....
Mouse   140 D--------FKNIMDFVQKKFKCCGGEDYRDWSKNQYHDCSAPGPLACGVPYTCCIRNTTDVVNT 196

  Fly   189 LTEGSGDGMMRPDCGRSENPSLWWDKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLF 253
            :.     |....|..|....::...:||.:::..||.....::..:.|||...|..|::.::|..
Mouse   197 MC-----GYKTIDKERLNAQNIIHVRGCTNAVLIWFMDNYTIMAGLLLGILLPQFLGVLLTLLYI 256

  Fly   254 CTVK 257
            ..|:
Mouse   257 TRVE 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 68/258 (26%)
NET-5_like_LEL 105..228 CDD:239418 37/129 (29%)
Tspan15NP_932113.2 Tetraspanin 20..>157 CDD:459767 39/146 (27%)
penumbra_like_LEL 114..231 CDD:239411 37/129 (29%)

Return to query results.
Submit another query.