DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and Tspan11

DIOPT Version :9

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_081019.1 Gene:Tspan11 / 68498 MGIID:1915748 Length:253 Species:Mus musculus


Alignment Length:257 Identity:72/257 - (28%)
Similarity:120/257 - (46%) Gaps:36/257 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NIILWLCSCAFLGAGLWLRLSYAGYATLLPQHAGLSADTIFMGIGGTGFVVSFFGCCGAWV--QS 79
            |...|:...|.:..|:|..:..:||.::|......::..|.:.:||......|.| .||.:  |.
Mouse    24 NFFFWVGGAAVMAVGIWTLVEKSGYLSILASSTFAASAYILIFVGGLVMTTGFLG-FGAIIREQK 87

  Fly    80 RCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYNSSDRGSLVAPSVASIW 144
            .||.. ||.|::::|:.|.:.|.:|.::...|...|...|...:..|| ...|.:.:..||    
Mouse    88 SCLST-YFCLLLVIFLVELVAGVLAHVYYQRLSDELKWHLNSTLTEHY-GQPRAAEITASV---- 146

  Fly   145 DSVQQSFECCGVSSYEDW----YDIQSWPGRRWVPESCCRTLYDQRQVLTEGSGDGMMRPDCGRS 205
            |.:||.|:|||.:|..||    |.:......|.||:|||:|:..:                ||:.
Mouse   147 DRLQQDFKCCGSNSSADWQHSAYILSQEALGRQVPDSCCKTVVAR----------------CGQR 195

  Fly   206 ENPSLWW--DKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLFCTVKHKRASDTY 265
            .:||..:  :.||...|:.:....|.::||||:|:|.:|:.|    |:|.|.: |:|....:
Mouse   196 AHPSNIYKVEGGCMAKLEQFVADHLLLMGAVGIGVACLQICG----MVLTCCL-HRRLQQQF 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspannin 8..256 CDD:278750 70/246 (28%)
NET-5_like_LEL 105..228 CDD:239418 33/128 (26%)
Tspan11NP_081019.1 Tetraspannin 16..244 CDD:395265 70/246 (28%)
CD151_like_LEL 112..220 CDD:239408 33/128 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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