DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and Tspan3

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_062767.3 Gene:Tspan3 / 56434 MGIID:1928098 Length:253 Species:Mus musculus


Alignment Length:270 Identity:68/270 - (25%)
Similarity:122/270 - (45%) Gaps:37/270 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNAGYTCIRRTFCWLNIILWLCSCAFLGAGLWLRLSYAGYATLLPQHAGLSADTIFMGIGGTGF 65
            ||..|.|..:....:||:|.|..:......|.::.::|..|.........|....:.:.:|...|
Mouse     1 MGQCGITSSKTVLVFLNLIFWGAAGILCYVGAYVFITYDDYDHFFEDVYTLFPAVVIIAVGALLF 65

  Fly    66 VVSFFGCCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYNSS 130
            ::...|||....:|||.|..:..:::::|::|.:|..:.:::|.    .:.||:...|::.|.:.
Mouse    66 IIGLIGCCATIRESRCGLATFVFILLLVFVTEVVVVVLGYVYRA----KVENEVDRSIQKVYKTY 126

  Fly   131 DRGSLVAPSVASIWDSVQQSFECCGVSSYEDWYDIQSW---PGRRWVPESCCRTLYDQRQVLTEG 192
            :..:..|.|.|.  |.||:...|||:.:|.|| :...|   ...:.||.||||.        |..
Mouse   127 NGTNSDAASRAI--DYVQRQLHCCGIHNYSDW-ENTDWFKETKNQSVPLSCCRE--------TAK 180

  Fly   193 SGDGMMRPDCGRSENPSLWWDKGC----AHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLF 253
            |.:|.:       .|||..:.:||    ...||...   ::|:.| .|..|.:||.|::.:.::.
Mouse   181 SCNGSL-------ANPSDLYAEGCEALVVKKLQEIL---MHVIWA-ALAFAAIQLLGMLCACIVL 234

  Fly   254 CTVKHKRASD 263
            |    :|:.|
Mouse   235 C----RRSRD 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 61/251 (24%)
NET-5_like_LEL 105..228 CDD:239418 34/129 (26%)
Tspan3NP_062767.3 Tetraspanin 9..235 CDD:459767 61/251 (24%)
TM4SF8_like_LEL 104..210 CDD:239416 34/130 (26%)

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