DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and tspan9a

DIOPT Version :9

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:XP_009291748.1 Gene:tspan9a / 555341 ZFINID:ZDB-GENE-060503-632 Length:336 Species:Danio rerio


Alignment Length:246 Identity:69/246 - (28%)
Similarity:128/246 - (52%) Gaps:26/246 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CIRRTFCWLNIILWLCSCAFLGAGLWLRLSYAGYATLLPQHAGLSADTIFMGIGGTGFVVSFFGC 72
            |::......|:|.|||.|..||.|:||.:|...:||..|....|||..:.:.||....|..|.||
Zfish   105 CLKYMMFVFNLIFWLCGCGLLGVGIWLSVSQGSFATFSPSFPSLSAANMVIAIGAIVMVTGFLGC 169

  Fly    73 CGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYNSSDRGSLVA 137
            .||..:::|||:.:|::::::.::|.::..:.|::...:......:|:.|:..:...::.|    
Zfish   170 LGAIKENKCLLLSFFIVLLIILLAELILLILFFVYSDKVSENAKQDLKDGLALYNTDNNIG---- 230

  Fly   138 PSVASIWDSVQQSFECCGVSSYEDWYDIQSWPGRRWVPESCCRTLYDQRQVLTEGSGDGMMRPDC 202
              :.:.|:.:|..::||||:.|.||:|...   .:.||:.||:..|.                :|
Zfish   231 --LRNAWNIIQAEWKCCGVTGYTDWHDALK---EKVVPDRCCQEHYQ----------------EC 274

  Fly   203 GRSENPSLWWDKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLF 253
            ||: :.:::|.:||...::.|.....:::|.:|:.|..|||.|:..||.||
Zfish   275 GRN-STNMFWTRGCYEKVEEWLEDNKHLLGTIGMCILVVQLLGMAFSMTLF 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspannin 8..256 CDD:278750 69/246 (28%)
NET-5_like_LEL 105..228 CDD:239418 26/122 (21%)
tspan9aXP_009291748.1 Tetraspannin 105..327 CDD:278750 69/246 (28%)
NET-5_like_LEL 202..299 CDD:239418 26/122 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 144 1.000 Domainoid score I4550
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4860
Inparanoid 1 1.050 146 1.000 Inparanoid score I4389
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1224210at2759
OrthoFinder 1 1.000 - - FOG0001172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_108304
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X124
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.770

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