DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp5D and tspan5a

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:XP_068078345.1 Gene:tspan5a / 450026 ZFINID:ZDB-GENE-041010-145 Length:301 Species:Danio rerio


Alignment Length:268 Identity:79/268 - (29%)
Similarity:120/268 - (44%) Gaps:27/268 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CIRRTFCWLNIILWLCSCAFLGAGLWL-----RLSYAGYATLLPQHAGLSADTIFMGIGGTGFVV 67
            ||:......|||.||...||||.|||.     .||.....|.|   .|.....:|:.:||..|::
Zfish    28 CIKYFIFGFNIIFWLLGVAFLGIGLWAWSEKGVLSNISSITDL---GGFDPVWLFLVVGGVMFIL 89

  Fly    68 SFFGCCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYNSSDR 132
            .|.||.||..::..||..:.:.:.::|..|...|.:||:|:..:...|...:...|..:.:..|.
Zfish    90 GFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGILAFVFKDWIKDQLNFFINNNIRAYRDDIDL 154

  Fly   133 GSLVAPSVASIWDSVQQSFECCGVSSYEDW-YDI-----QSWPGRR--WVPESCCRTLYDQRQVL 189
            .:|:        |..|:.:||||....:|| .:|     .|.|.|.  .||.|||.....:..:.
Zfish   155 QNLI--------DFTQEYWECCGAFGADDWNLNIYFNCTDSNPSREKCGVPFSCCTKDPAEDVIN 211

  Fly   190 TEGSGDGMMRPDCGRSENPSLWWDKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLFC 254
            |:...|...:||   :|..:....|||....:.|....|.||..:.:|||.:|:||:..:..|..
Zfish   212 TQCGYDVRAKPD---AEQKTYIHVKGCVPQFEKWLQDNLTVVAGIFIGIALLQIFGICLAQNLVS 273

  Fly   255 TVKHKRAS 262
            .::..|||
Zfish   274 DIEAVRAS 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 75/257 (29%)
NET-5_like_LEL 105..228 CDD:239418 32/130 (25%)
tspan5aXP_068078345.1 Tetraspanin 29..272 CDD:459767 74/256 (29%)
TM4SF9_like_LEL 127..247 CDD:239412 32/130 (25%)

Return to query results.
Submit another query.