DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and tspan4a

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:XP_073785120.1 Gene:tspan4a / 436620 ZFINID:ZDB-GENE-040718-38 Length:321 Species:Danio rerio


Alignment Length:258 Identity:78/258 - (30%)
Similarity:125/258 - (48%) Gaps:30/258 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IRRTFCWLNIILWLCSCAFLGAGLWLRLSYAGYATLLPQHAGLSADTIFMGIGGTGFVVSFFGCC 73
            :|....:.|::.|||.|..||.|:||.::...:|||......|||..:.:..|....|:...||.
Zfish    91 LRYGMVFFNLLFWLCGCGILGVGVWLSITQGNFATLSSSLPSLSAANLLIAAGTVVMVIGCLGCV 155

  Fly    74 GAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYNSSDRGSLVAP 138
            ||..::|.||:.:|:|::::|:.|.|...:.|.::..:.....|:|:.|::......:.|     
Zfish   156 GAVKENRPLLLSFFILLLLIFLLEILFIILFFSYQDQIDLYAQNDLKKGLQLFGTEGNIG----- 215

  Fly   139 SVASIWDSVQQSFECCGVSSYEDWYDIQSWPGRRWVPESCCRTLYDQRQVLTEGSGDGMMRPDCG 203
             :.:.|..||..|.||||:::.||:.:.:   ...||:|||....|                :||
Zfish   216 -LTNAWSIVQTDFRCCGVTNHTDWFQVYN---TSRVPDSCCLEYSD----------------NCG 260

  Fly   204 RSENPSLWWDKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLFC-TVKHKRASDTY 265
             .|||..||...|...::.|....|..:....|..|..|:.||:.||.:|| |||   |:|||
Zfish   261 -LENPGTWWTAPCYERVKGWLQENLVALWIFALCTALTQILGLVFSMTIFCHTVK---AADTY 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 69/244 (28%)
NET-5_like_LEL 105..228 CDD:239418 30/122 (25%)
tspan4aXP_073785120.1 None

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