DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and cd9b

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:XP_068075677.1 Gene:cd9b / 406737 ZFINID:ZDB-GENE-040426-2768 Length:231 Species:Danio rerio


Alignment Length:267 Identity:67/267 - (25%)
Similarity:115/267 - (43%) Gaps:55/267 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NAGYTCIRRTFCWLNIILWLCSCAFLGAGLWLRLSYAGYATLLPQHAGLSADTIFM-GI------ 60
            ::|..||:....:.|.:|||.....|..|||||..    |.........:..|:|: |:      
Zfish     8 SSGEQCIKYIIFFFNFMLWLAGTGVLAVGLWLRFD----AKTKEFFTAENGQTVFLTGVYILIVA 68

  Fly    61 GGTGFVVSFFGCCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIER 125
            |....||.|.|||||..:|.|:|.|:||.::::|.:|...|.        .|.:..:::...|::
Zfish    69 GAVMMVVGFLGCCGAIKESACMLGLFFMFLLVIFAAEVAAGI--------WGLSNKDKIVSDIQQ 125

  Fly   126 HYNSSDRGSLVAPS--VASIWDSVQQSFECCGVSSYEDWYDIQSWPGRRWVPESCCRTLYDQRQV 188
            .|..:.:....:|.  :.....::..|.:|||.:.                             :
Zfish   126 FYTQTVKNYKESPDGPLKETLTAIHFSLQCCGPTG-----------------------------L 161

  Fly   189 LTEGSGDGMMRPDCGRSENPSLWWDKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLF 253
            :|:|     :...|.:.|..:.....||:..:|..|..:|:|:|.||:||..:.:||:|.||||.
Zfish   162 VTDG-----VSVTCPKQEGLANVITTGCSSVIQDMFNSRLHVIGGVGIGIGVIMVFGMIFSMLLC 221

  Fly   254 CTVKHKR 260
            |.::..|
Zfish   222 CAIRRTR 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 63/253 (25%)
NET-5_like_LEL 105..228 CDD:239418 16/124 (13%)
cd9bXP_068075677.1 Tetraspanin 14..222 CDD:459767 63/253 (25%)
CD9_LEL 113..196 CDD:239405 15/116 (13%)

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