DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and tspan13

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_989184.1 Gene:tspan13 / 394792 XenbaseID:XB-GENE-1011146 Length:201 Species:Xenopus tropicalis


Alignment Length:270 Identity:54/270 - (20%)
Similarity:102/270 - (37%) Gaps:77/270 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GYTCIRRTFCWLNIILWLCSCAFLGAGLWLRLSYAGYATLLPQHAGLSADTIFMGIGGTGFVVSF 69
            |:||.:.:.|.||::..:.|...:|...|    ..|:..:    :.|....:.:.:|...|:::.
 Frog     5 GFTCSKNSLCVLNLLYIMVSLLLIGVAAW----GIGFGLI----SSLRVVGVAVAVGILLFLIAL 61

  Fly    70 FGCCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYNSSDRGS 134
            .|..||....:.||..|.:::.::|:.:|.| |.|.|   .|.:...::|   :|..:|.::   
 Frog    62 VGLIGAIKHHQVLLFFYMIILFLVFVVQFSV-SCASL---ALNKDQQDQL---LEVGWNHTN--- 116

  Fly   135 LVAPSVASIWDSVQQSFECCGVSSYEDWYDIQSWPGRRWVPESCCRTLYDQRQVLTEGSGDGMMR 199
                   .....:::|..|||..||..             .::|..|                ..
 Frog   117 -------GAHTDIERSLNCCGFRSYSK-------------NDTCGAT----------------CA 145

  Fly   200 PDCGRSENPSLWWDKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLFCTVKHKRASDT 264
            |||           ..||..::|.....|.|||.:|...:|.::.|      ::.|.:::...| 
 Frog   146 PDC-----------HTCAPIIESHAAEVLRVVGGIGFFFSFTEILG------VWLTYRYRNQKD- 192

  Fly   265 YKSYSPSIDP 274
                 |..:|
 Frog   193 -----PRANP 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 47/244 (19%)
NET-5_like_LEL 105..228 CDD:239418 19/122 (16%)
tspan13NP_989184.1 Tetraspanin 9..187 CDD:459767 48/248 (19%)

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