DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and Tsp47F

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster


Alignment Length:197 Identity:57/197 - (28%)
Similarity:98/197 - (49%) Gaps:22/197 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 FVVSFFGCCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYNS 129
            |:::..||.||..:|..||:.:.:|:.::|:.|..||..|.:|:..|...:.|.|:..|:|. ||
  Fly    64 FLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRS-NS 127

  Fly   130 SDRGSLVAPSVASIWDSVQQSFECCGVSSYEDWYDIQSWPGRRWVPESCCRTLYDQRQVLTEGSG 194
            .|         ...||::||...||||.|..||..:.:   .:.:|.|||     |.|.:....|
  Fly   128 ED---------TMAWDNIQQKLMCCGVDSPADWRTLSA---NKTLPGSCC-----QPQYIDSTVG 175

  Fly   195 DGMMRPDCGRSENPSLWWDKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLFCTVKHK 259
            ..:..|..|:.:    ::..||...|:........::..||:||||:|:.|::.:..|..:::.:
  Fly   176 HCLESPALGKDK----YFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQE 236

  Fly   260 RA 261
            ||
  Fly   237 RA 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 55/188 (29%)
NET-5_like_LEL 105..228 CDD:239418 32/122 (26%)
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 55/188 (29%)
tetraspanin_LEL <134..205 CDD:351888 22/82 (27%)

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