DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and Tsp42Ej

DIOPT Version :9

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_523636.1 Gene:Tsp42Ej / 35620 FlyBaseID:FBgn0033132 Length:227 Species:Drosophila melanogaster


Alignment Length:249 Identity:56/249 - (22%)
Similarity:85/249 - (34%) Gaps:67/249 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 TCIRRTFCWLNIILWLCSCAFLGAGLWLRLSYAGYATLLPQHAGLSADTIFMGIGGTGFVVSFFG 71
            |||....|  |:..:.|.....|:.:.:   |..|.:.|              .||..|.|:|.|
  Fly    17 TCILIVTC--NVFFFSCGVTTWGSAVSV---YGSYGSAL--------------CGGAVFGVAFLG 62

  Fly    72 CCGAWVQSRCLLVLYFMLIVMLFMSEFLV---GSIAFLF---RGGLGRTLANELRFGIERHYNSS 130
            ...|      |.|.|...|..|..|..::   ||..|.|   |..|.......:|...||..:|.
  Fly    63 MYVA------LKVSYKYSIYYLICSGLVIAALGSYLFTFTAMREQLMGRFEERMRDLFERKTHSD 121

  Fly   131 DRGSLVAPSVASIWDSVQQSFECCGVSSYEDWYDIQSWPGRRWVPESCCRTLYDQRQVLTEGSGD 195
            |:           ...|...|.|||:...:|:  :|...|.  :|.|||...             
  Fly   122 DK-----------MQPVHSLFGCCGIEGPQDY--LQEEHGA--LPSSCCYAF------------- 158

  Fly   196 GMMRPDCGRSENPSLWWDKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITS 249
                 ||.:   |:..:::||:....:....|..:.....:.|..::..||.|:
  Fly   159 -----DCSK---PAHVYEEGCSTKAVATLRMQAELNYYSCMAIIALEFLGLFTA 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspannin 8..256 CDD:278750 55/248 (22%)
NET-5_like_LEL 105..228 CDD:239418 26/125 (21%)
Tsp42EjNP_523636.1 Tetraspannin 11..211 CDD:278750 56/249 (22%)
tetraspanin_LEL 97..183 CDD:239401 24/121 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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