DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp5D and Tsp42Ee

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_523631.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster


Alignment Length:217 Identity:55/217 - (25%)
Similarity:92/217 - (42%) Gaps:52/217 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 IFMGIGGTGFVVSFFGCCGAWVQSRCLLVLY--FMLIVMLFMSEFLVGSIAFLFRGGLGRTLANE 118
            |.:.:|.....:||.|||||..:|.|:.:.|  |:||:::....|:|  :.|..|......:.|.
  Fly    57 ILISLGSIVVFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVV--LLFTHREEFENAMGNV 119

  Fly   119 LRFGIERHYNSSD--RGSLVAPSVASIWDSVQQSFECCGVSSYEDWY---DIQSWPGRRWVPESC 178
                ||..:||..  :|        .::|::|:|..|||.||..|:.   |:        ||.||
  Fly   120 ----IENAWNSEHTYKG--------GVFDTIQKSLHCCGSSSALDYIGKGDL--------VPPSC 164

  Fly   179 CRTLYDQRQVLTEGSGDGMMRPDCGRSENPSLWWDKGCAHSLQSWFTGQLNVVGAVGLGIAFVQL 243
            |             ||..::         |:.:: .||........|...:....||:|:..::|
  Fly   165 C-------------SGSCLI---------PTNYY-PGCRGKFVELMTTGSDNAKYVGIGLIGIEL 206

  Fly   244 FGLITSMLLFCTVKHKRASDTY 265
            .|.|.:..|...|::.:..:.|
  Fly   207 IGFIFACCLANNVRNYKRRNAY 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 53/204 (26%)
NET-5_like_LEL 105..228 CDD:239418 29/127 (23%)
Tsp42EeNP_523631.1 Tetraspanin 8..217 CDD:459767 53/204 (26%)

Return to query results.
Submit another query.