DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and cd82b

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_997828.1 Gene:cd82b / 324137 ZFINID:ZDB-GENE-030131-2857 Length:256 Species:Danio rerio


Alignment Length:268 Identity:76/268 - (28%)
Similarity:121/268 - (45%) Gaps:34/268 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GYTCIRRT--FCWL-NIILWLCSCAFLGAGLWLRLSYAGYATLLPQHAGLSADT---IFMGIGGT 63
            |..||..|  |.:| |::.::.....:|.|||:||....:.|:| |.:..|...   |.:|||..
Zfish     2 GKGCIAATKYFLFLFNLLFFILGAVIMGFGLWVRLDSQSFLTVL-QESSTSLKVGAYILIGIGSL 65

  Fly    64 GFVVSFFGCCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGL-GRT--LANELRFGIER 125
            ..::.|.||.||..:.||||.|||..::::.:::.....:.:..|..| |.|  :.|::......
Zfish    66 SMLMGFLGCIGAIYEIRCLLGLYFTCLLLILIAQVTAAVLIYFQRDLLKGETYNIVNKILVNYTG 130

  Fly   126 HYNSSDRGSLVAPSVASIWDSVQQSFECCGVSSYEDWYDIQSWPGRRWVPESC-CRTLYDQRQVL 189
            ..|:|:          ..||.:|::.:|||.|...||.:.........:...| ||         
Zfish   131 SNNTSE----------DAWDYIQRTMKCCGWSGQSDWKENVMIKNNSKILYPCSCR--------- 176

  Fly   190 TEGSGDGMMRPDCGRSENPSLWW---DKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSML 251
             ..|..|..:.:.|..|..|..|   .|||..||:.|......|:..|.:|||.::|.|:|.||.
Zfish   177 -NESISGSDKQEKGFCEGLSPQWPVFTKGCISSLEDWILRNCGVILGVCVGIAVIELLGMILSMC 240

  Fly   252 LFCTVKHK 259
            |..:|:.:
Zfish   241 LCKSVQQE 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 73/257 (28%)
NET-5_like_LEL 105..228 CDD:239418 31/129 (24%)
cd82bNP_997828.1 Tetraspanin 24..243 CDD:459767 68/239 (28%)
CD37_CD82_like_LEL 106..218 CDD:239413 31/131 (24%)

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