DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp5D and cd82a

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_997826.3 Gene:cd82a / 324098 ZFINID:ZDB-GENE-030131-2818 Length:256 Species:Danio rerio


Alignment Length:272 Identity:69/272 - (25%)
Similarity:120/272 - (44%) Gaps:43/272 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GYTCIRRT--FCWL-NIILWLCSCAFLGAGLWLRLSYAGYATLLPQHAGL--SADTIFMGIGGTG 64
            |..||..|  |.:| |.|.::.....:|.|||:.|.......:|.:.:.:  ....|.:|:|...
Zfish     2 GKGCITATKYFLFLFNFIFFIFGATIMGFGLWILLDNQSLIAVLQESSVILKVVSYILIGVGSFS 66

  Fly    65 FVVSFFGCCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYNS 129
            .::.|.||.||..:.||||.|||..::::.:::..| ||...|:..|.:|.|:::...:..:|..
Zfish    67 MLLGFLGCLGAIYEIRCLLGLYFTCLLLILLAQVAV-SILIYFQRDLLKTEADKIVSQVVANYPG 130

  Fly   130 SDRGSLVAPSVASIWDSVQQSFECCGVSSYEDWYD--------IQSWPGRRWVPESC-CRTLYDQ 185
            .::      :....||.:|::.:|||.:...||.:        :..:|        | |.....|
Zfish   131 QNK------TAEQAWDYLQRTMQCCGWNGRMDWDENHIIKNNTVPLYP--------CSCHNYSIQ 181

  Fly   186 RQVLTEGSGDGMMRPDCGRSENPSLWW---DKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLI 247
            ..::          ||.|..:..|..|   ..||...:.||......::..:.||:|.::|.|:|
Zfish   182 APIV----------PDNGFCQASSSDWPIYQTGCLEHVGSWLFTNYGIILGICLGVAVIELLGMI 236

  Fly   248 TSMLLFCTVKHK 259
            .||.| |...|:
Zfish   237 FSMGL-CKSVHQ 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 65/261 (25%)
NET-5_like_LEL 105..228 CDD:239418 26/134 (19%)
cd82aNP_997826.3 None

Return to query results.
Submit another query.