DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and cd9a

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:XP_005159038.1 Gene:cd9a / 322455 ZFINID:ZDB-GENE-030131-1175 Length:228 Species:Danio rerio


Alignment Length:279 Identity:64/279 - (22%)
Similarity:102/279 - (36%) Gaps:83/279 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GYTCIRRTFCWLNIILWLCSCAFLGAGLWLRLS------YAGYATLLPQHAGLSADTIFMGIGGT 63
            |..|::......|.|.|:...|.|..|||||..      :.|..:....:.|:   .|.:..|..
Zfish     7 GEMCVKYLMFVFNFIFWIAGTAVLAVGLWLRFDPKTKSLFEGENSPYVFYTGV---YILIAAGAL 68

  Fly    64 GFVVSFFGCCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRF--GIERH 126
            ..||.|||||||..:|.|:|.|:|..::::|..|...|...|          :|:.:.  .|...
Zfish    69 MMVVGFFGCCGAIQESPCMLGLFFFFLLVIFAVEVAAGIWGF----------SNQTKVTEDITTF 123

  Fly   127 YNSSDRGSLVAPSVASIWDSVQQS---------------FECCGVSSYEDWYDIQSWPGRRWVPE 176
            |..:             :|:.|||               ..|||.|.                  
Zfish   124 YRQT-------------YDTYQQSKQEALKKTLRLFQHGLNCCGPSG------------------ 157

  Fly   177 SCCRTLYDQRQVLTEGSGDGMMRPDCGRSENPSLWWDKGCAHSLQSWFTGQLNVVGAVGLGIAFV 241
                   :.::.|.|         .|.:.|.......|.|..::...|..:|:::|.||:....:
Zfish   158 -------NMQESLDE---------TCPKKEGLDNLIIKSCPDAIDEVFNSKLHIIGGVGIATGVI 206

  Fly   242 QLFGLITSMLLFCTVKHKR 260
            .:||:|.||:|.|.::..|
Zfish   207 MIFGMIFSMMLCCAIRKTR 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 60/267 (22%)
NET-5_like_LEL 105..228 CDD:239418 19/139 (14%)
cd9aXP_005159038.1 Tetraspanin 11..219 CDD:459767 60/267 (22%)
CD9_LEL 110..193 CDD:239405 19/139 (14%)

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