DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and Tspan11

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_001019433.1 Gene:Tspan11 / 312727 RGDID:1305424 Length:253 Species:Rattus norvegicus


Alignment Length:252 Identity:69/252 - (27%)
Similarity:116/252 - (46%) Gaps:36/252 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NIILWLCSCAFLGAGLWLRLSYAGYATLLPQHAGLSADTIFMGIGGTGFVVSFFGCCGAWV--QS 79
            |...|:...|.:..|:|..:..:.|.::|......::..:.:.:||......|.| .||.:  |.
  Rat    24 NFFFWVGGAAVMAVGIWTLVEKSVYLSILASSTFAASAYVLIFVGGLVMTTGFLG-FGAIIREQK 87

  Fly    80 RCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYNSSDRGSLVAPSVASIW 144
            .||.. ||.|::.:|:.|.:.|.:|.::...|...|...|...:..||     |...|..:.:..
  Rat    88 SCLST-YFCLLLAIFLVELVAGVLAHVYYQRLSDELKRHLHSTLTEHY-----GQPGAAEITASV 146

  Fly   145 DSVQQSFECCGVSSYEDW----YDIQSWPGRRWVPESCCRTLYDQRQVLTEGSGDGMMRPDCGRS 205
            |.:||.|:|||.:|..||    |.:......|.||:|||:|:..:                ||:.
  Rat   147 DRLQQDFKCCGSNSSADWQHSVYILSQEAIGRQVPDSCCKTVVAR----------------CGQR 195

  Fly   206 ENPSLWW--DKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLFCTVKHKR 260
            .:||..:  :.||...|:.:....|.::||||:|:|.:|:.|    |:|.|.: |:|
  Rat   196 AHPSNIYKVEGGCMAKLEQFLADHLLLMGAVGIGVACLQICG----MVLTCCL-HRR 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 66/244 (27%)
NET-5_like_LEL 105..228 CDD:239418 32/128 (25%)
Tspan11NP_001019433.1 Tetraspanin 16..244 CDD:459767 67/246 (27%)
CD151_like_LEL 112..220 CDD:239408 32/128 (25%)

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