DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and tsp-21

DIOPT Version :9

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_001370185.1 Gene:tsp-21 / 259720 WormBaseID:WBGene00023491 Length:301 Species:Caenorhabditis elegans


Alignment Length:273 Identity:71/273 - (26%)
Similarity:125/273 - (45%) Gaps:21/273 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FCWLNIILWLCSCAFLGAGLWLRLSYAGYATLLP-QHAGLSADTIFMGIGGTGFVVSFFGCCGAW 76
            |...|:...:...:.|..|:||..|...:..|.| .::.|||..:.:..|.|.|::...|..|..
 Worm    17 FFLANVCFLISGLSSLIVGVWLYSSKNNFIELTPTSYSALSAAGLCVFTGVTIFIIVAVGYLGVS 81

  Fly    77 VQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANE-LRFGIERHYNSSDRGSLVAPSV 140
            ..::.||..|...:::|    .||..||.: .|.|.:..|.| ||..:..:.|::...:.:...:
 Worm    82 WSNKSLLYSYIGFVILL----ILVHGIARI-TGSLHKEEAKENLRKSMLHNINTTAVVTKIGREI 141

  Fly   141 --ASIWDSVQQSFECCGVSSYEDWYDIQSWPGRRWVPESCCRTLYDQRQVLTEGSGDGMMRPDCG 203
              :..||.:|:..:||||.:|.||:....||...:.|:|||...:...:..||         :||
 Worm   142 KLSLTWDHLQRELQCCGVDNYTDWHYSVHWPNNLYTPDSCCDPQHFDAENGTE---------NCG 197

  Fly   204 R-SENPSLWWDKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLFCTVKHKRASDTYKS 267
            : .:..||.:.|||......|....:.:|..|...:..|::..||.|:::...:|:.| ..|.:|
 Worm   198 KLPDEQSLLYQKGCFPKFSDWLYHHIILVNWVTSILFVVEILLLILSLVVLRVLKNSR-HKTRRS 261

  Fly   268 YSPSIDPQTRTSS 280
            :... ||:|.:.:
 Worm   262 HRER-DPETTSEN 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspannin 8..256 CDD:278750 64/247 (26%)
NET-5_like_LEL 105..228 CDD:239418 33/126 (26%)
tsp-21NP_001370185.1 CD151_like_LEL 106..223 CDD:239408 33/126 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1224210at2759
OrthoFinder 1 1.000 - - FOG0001172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_108304
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X124
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.720

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