DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and tsp-17

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_001129920.2 Gene:tsp-17 / 192067 WormBaseID:WBGene00006643 Length:312 Species:Caenorhabditis elegans


Alignment Length:325 Identity:69/325 - (21%)
Similarity:108/325 - (33%) Gaps:100/325 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GYTCIRRTFCWLNIILWLCSCAFLGAGLWLRLS-----------YAGYATLLPQHAGLSADTIFM 58
            |..|:|......:|..||.:...:..|||:.|.           ::....||...|.:|     :
 Worm     7 GGGCLRVAVSIFSIYYWLSALGHVFLGLWMLLDPKRNYILDLVHFSENDPLLKASAYVS-----L 66

  Fly    59 GIGGTGFVVSFFGCCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFR-----GGLGRTLANE 118
            ..|....:|.|.|.|||..:||.||:.:.|.::..|:::..:|:::..::     ..:|..|.| 
 Worm    67 VCGCAQLLVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFYKDKFSNNYMGVYLKN- 130

  Fly   119 LRFGIERHYNSSDRGSLVAP----------------------------------SVASIWDSVQQ 149
                  ..||...|...|.|                                  .|....|.:|.
 Worm   131 ------LTYNRYSRDRWVLPLMDTIQFYVYSVKENVREIVKSKYGVMTSEPENKMVTEFIDKLQF 189

  Fly   150 SFECCGVSSYEDWYDIQSWPGRRW---------------VPESCCRTLYDQRQVLTEGSGDGMMR 199
            ..:|||.....|:  |.|    ||               .|.|||          |:.:|...:.
 Worm   190 YEKCCGSLGPTDY--ISS----RWSQSTNQDSEEIESPLFPVSCC----------TQITGASALN 238

  Fly   200 P------DCGRSENPSLWWDK-GCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLFCTVK 257
            |      .|.:......|... ||:..|.|||..|:.:....|.|.|...:.|:..|..|...::
 Worm   239 PLAKSYARCQQIGANRQWRHAVGCSERLMSWFNEQIWIFVGFGFGSALTMMLGICLSCCLISKIR 303

  Fly   258  257
             Worm   304  303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 67/316 (21%)
NET-5_like_LEL 105..228 CDD:239418 34/183 (19%)
tsp-17NP_001129920.2 Tetraspanin 11..>150 CDD:459767 34/150 (23%)
CD37_CD82_like_LEL 153..275 CDD:239413 27/137 (20%)

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