DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and tsp-15

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_492404.1 Gene:tsp-15 / 192065 WormBaseID:WBGene00006641 Length:258 Species:Caenorhabditis elegans


Alignment Length:270 Identity:58/270 - (21%)
Similarity:104/270 - (38%) Gaps:57/270 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNAGYTCIRRTFCWLNIILWLCSCAF----LGAGLWLRLSYAGYATLLPQHAGLSADTIFMGIG 61
            :|::.|....|...:..|:..|.|..|    :..|:||....:.||.|:       :.::::.:|
 Worm     4 LGDSAYGARGRLIKFSYIVTALISILFSISCICYGIWLLARRSQYAELV-------SPSLYVDVG 61

  Fly    62 GTGFVVSFFG------CCGA-WVQSRCLL----VLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTL 115
            ....::|...      |..| :.:.||.:    |...::.|||.:.    |.|...||..|....
 Worm    62 RILVIISILSILNYLICFYAIFKEMRCFVTSCAVASIVIAVMLIIG----GCIGLNFRDQLTHYT 122

  Fly   116 ANELRF--GIERHYNSSDRGSLVAPSVASIWDSVQQSFECCGVSSYEDWYDIQSWPGRRW----- 173
            ...|:.  .:...|.:.|     ...:...||::|.:|:||||:..:   :.|.|...:|     
 Worm   123 PLNLKMLTSLRELYGTHD-----MKGITESWDALQSNFKCCGVNGTD---NAQIWKTSKWYMHQR 179

  Fly   174 -----VPESCCRTLYDQRQVLTEGSGDGMMRPDCGRSENPSLWWDKGCAHSLQSWFTGQLNVVGA 233
                 :|||||.....:|           .|.:....:.|..::...|...||:.....:||...
 Worm   180 APKLLIPESCCIPSEIER-----------CRSNPFDQDAPPPYYTSTCYEPLQNDLLHVMNVASW 233

  Fly   234 VGLGIAFVQL 243
            :.:..|.||:
 Worm   234 LCITNAIVQI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 56/262 (21%)
NET-5_like_LEL 105..228 CDD:239418 28/134 (21%)
tsp-15NP_492404.1 Tetraspanin 16..>159 CDD:459767 33/158 (21%)
uroplakin_I_like_LEL 110..228 CDD:239409 29/136 (21%)

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