DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and tsp-11

DIOPT Version :9

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_509546.4 Gene:tsp-11 / 192064 WormBaseID:WBGene00006637 Length:287 Species:Caenorhabditis elegans


Alignment Length:282 Identity:75/282 - (26%)
Similarity:104/282 - (36%) Gaps:76/282 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NIILWLCSCAFLGAGLWLRL-SYA----GYATL----LPQHAGLS------------ADTIFMGI 60
            |::..||....||.||||.| .||    .:||.    ..|.|||.            ...:|:| 
 Worm    26 NLVFLLCGLICLGIGLWLVLDKYAIDNLAFATAKVQGYDQDAGLRDLATKPTAVRQFGYLLFVG- 89

  Fly    61 GGTGF---VVSFFGCCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFL----FRGGLGRTLANE 118
               ||   ||:|.|||||..:.|.||..|...::::...:......|||    |.......|.:.
 Worm    90 ---GFIVIVVAFLGCCGAAKEWRPLLCCYSSCLMLILAIQIAATIYAFLHSHMFENDFRDILHSS 151

  Fly   119 LRFGIERHYNSSDR---------GSLVAPSVASIWDSVQQSFECCGVSS------YEDWYDIQSW 168
            |:.     ||.:|.         |.|    |.:.||.:.....||||.|      ...||.:.. 
 Worm   152 LKM-----YNGTDNMKVSNNPQDGLL----VKTAWDKIMIEKSCCGVDSKIGEFNNSGWYQLNH- 206

  Fly   169 PGRRWVPESCCRTLYDQRQVLTEGSGDGMMRPDCGRSENPSLWWDKGCAHSLQSWF---TGQLNV 230
             ||...|.:||..  |:.         |.:||.|    |..:....||...:...|   |....:
 Worm   207 -GRYQFPPACCPP--DEH---------GRLRPYC----NTIMRHSHGCYAKIAESFEEVTSHFKI 255

  Fly   231 VGAVGLGIAFVQLFGLITSMLL 252
            |....:..|.:|:.|::....|
 Worm   256 VSWTVVLFALIQVVGIVVGFWL 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspannin 8..256 CDD:278750 75/282 (27%)
NET-5_like_LEL 105..228 CDD:239418 35/144 (24%)
tsp-11NP_509546.4 Tetraspannin 18..281 CDD:278750 75/282 (27%)
uroplakin_I_like_LEL 132..247 CDD:239409 34/140 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X124
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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