DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and tsp-8

DIOPT Version :10

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_510445.1 Gene:tsp-8 / 181567 WormBaseID:WBGene00006634 Length:282 Species:Caenorhabditis elegans


Alignment Length:292 Identity:69/292 - (23%)
Similarity:113/292 - (38%) Gaps:63/292 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 TCIRR----TFCWLNIILWLCSCAFLGAGLWLRLSYAG--YATLLPQHAGL--SADTIFMGIGGT 63
            :|:..    ||.: |...||......|.|:||....|.  :..|...|.|.  ......:|.|..
 Worm     3 SCVNALRIVTFLF-NFAFWLSGVVVFGLGIWLLFDPAASDFFALHSTHPGAFRYVGWFLVGAGAI 66

  Fly    64 GFVVSFFGCCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYN 128
            ..:|.:|||.|||..::|.|..:..::::.|..|.......|..:..:...:.:.:...|...|:
 Worm    67 IILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDTIRNRYS 131

  Fly   129 SSDRGSLVAPSVASIWDSVQQSFECCGVSSYEDW------------------------YDIQSWP 169
            |.       .:....:|:||:.||||||.:|.||                        :.|.::.
 Worm   132 SE-------TAFKDAFDTVQEKFECCGVKTYTDWLSARWDAEPSTQLEVNEEDAGRIEHGIGAFG 189

  Fly   170 GRRW-----VPESCCRTLYDQRQVLTEGSGDGMMRPDCGR--SENPSLWW-----DKGCAHSLQS 222
            |.:.     ||.|||..           .|......:|||  |:.|...:     .:|||.::..
 Worm   190 GNKGTGYGRVPSSCCNE-----------HGKLSYPNNCGRSFSQAPLNTYAQFINTRGCADAVYE 243

  Fly   223 WFTGQLNVVGAVGLGIAFVQLFGLITSMLLFC 254
            ..:..|:::..|.:.:..|||.|::.||.|.|
 Worm   244 SVSSSLSLIVGVCVVLCIVQLLGIVLSMTLCC 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 67/288 (23%)
NET-5_like_LEL 105..228 CDD:239418 32/158 (20%)
tsp-8NP_510445.1 Tetraspanin 8..>151 CDD:459767 36/150 (24%)
tetraspanin_LEL 108..243 CDD:239401 32/152 (21%)

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