DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp5D and LOC100492951

DIOPT Version :9

Sequence 1:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster
Sequence 2:XP_002936078.2 Gene:LOC100492951 / 100492951 -ID:- Length:330 Species:Xenopus tropicalis


Alignment Length:258 Identity:73/258 - (28%)
Similarity:127/258 - (49%) Gaps:29/258 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CIRRTFCWLNIILWLCSCAFLGAGLWLRLSYAGYATLLPQHAGLSADTIFMGIGGTGFVVSFFGC 72
            |::......|::.||..|..||.|:||.::...:|||......|||..|.:..|....:|.|.||
 Frog   100 CMKYLMFVFNLLFWLGGCGILGVGIWLAVTQGNFATLSSSFPSLSAANILIATGTIVMIVGFLGC 164

  Fly    73 CGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYNSSDRGSLVA 137
            .||..:::.||:.:|:|::::|:.|.:|.::.|::...:.|....:|:.|:..:....:.|    
 Frog   165 IGAIKENKYLLLSFFILLLIIFLLELIVVTLFFIYTDKIDRYAQQDLKKGLHLYGTEGNIG---- 225

  Fly   138 PSVASIWDSVQQSFECCGVSSYEDWYDIQSWPGRRWVPESCCRTLYDQRQVLTEGSGDGMMRPDC 202
              :.:.|..:|..|.||||::|.||:::.:   ...||:|||....:                :|
 Frog   226 --LTNAWSIIQTDFRCCGVANYTDWFEVYN---ATRVPDSCCLEFSE----------------NC 269

  Fly   203 GRSENPSLWWDKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLFCTVKHKRASDTY 265
            | ..:|..||...|..:::.|....|..||..||..|.||:.||..:|.::|.:   ..:|||
 Frog   270 G-LHSPGTWWKSPCYDTVKIWLHENLLAVGIFGLCTALVQILGLTFAMTMYCQM---AKTDTY 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp5DNP_001259266.1 Tetraspannin 8..256 CDD:278750 70/247 (28%)
NET-5_like_LEL 105..228 CDD:239418 27/122 (22%)
LOC100492951XP_002936078.2 Tetraspannin 102..318 CDD:366035 68/241 (28%)
NET-5_like_LEL 197..294 CDD:239418 27/122 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 143 1.000 Domainoid score I4608
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 149 1.000 Inparanoid score I4273
OMA 1 1.010 - - QHG45282
OrthoDB 1 1.010 - - D1224210at2759
OrthoFinder 1 1.000 - - FOG0001172
OrthoInspector 1 1.000 - - otm48583
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X124
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.980

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