DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5921 and Ush1c

DIOPT Version :9

Sequence 1:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster
Sequence 2:NP_710143.2 Gene:Ush1c / 72088 MGIID:1919338 Length:910 Species:Mus musculus


Alignment Length:235 Identity:91/235 - (38%)
Similarity:129/235 - (54%) Gaps:27/235 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 SSRLRVLRLVRPHQRRLLVGGPERGSTYGFTVRGGREHGTGFFVSHVEHGGEAHLKGLRIGDQIL 122
            |.:|:.:||.|.|...|           |.:||||.|.|.|.|:||:..||:|...||::||:|:
Mouse    82 SRKLKEVRLDRLHPEGL-----------GLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIV 135

  Fly   123 RINGFRLDDAVHKEFIQLVAGQDRVTLKVRGVGMLPVRDLPEERLSWSVV-KLPSVSGTPSESSF 186
            ||||:.:....|:|.|.|:..:..|::|||.:|::||:..|||.|.|..| :..|.||       
Mouse   136 RINGYSISSCTHEEVINLIRTKKTVSIKVRHIGLIPVKSSPEESLKWQYVDQFVSESG------- 193

  Fly   187 KGERRG-------ASRDISVVLHVAPRTKLGLGICKGPEWKPGIFVQFTKDRSVAREAGLRPGDQ 244
             |.|.|       .:::..|.:.:.....||..|..||..||||||...|..|::.|.||..|||
Mouse   194 -GVRGGLGSPGNRTTKEKKVFISLVGSRGLGCSISSGPIQKPGIFVSHVKPGSLSAEVGLETGDQ 257

  Fly   245 ILSVNSIDFSDVLFSEAVAVMKSSSKLDMVVRTAAGCDLF 284
            |:.||.|||:::...|||.|:|||..|.:.:...||.:||
Mouse   258 IVEVNGIDFTNLDHKEAVNVLKSSRSLTISIVAGAGRELF 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492 29/69 (42%)
PDZ_signaling 197..276 CDD:238492 34/78 (44%)
Ush1cNP_710143.2 N-terminal domain. /evidence=ECO:0000250|UniProtKB:Q9Y6N9 1..86 1/3 (33%)
harmonin_N 2..80 CDD:259819
PDZ_signaling 85..165 CDD:238492 35/90 (39%)
Mediates interaction with MYO7B. /evidence=ECO:0000250|UniProtKB:Q9Y6N9 194..833 41/104 (39%)
PDZ_signaling 209..289 CDD:238492 34/79 (43%)
Cgr1 <309..>358 CDD:281823
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..688
PDZ_signaling 751..838 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 890..910
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I10248
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007864
OrthoInspector 1 1.000 - - oto94918
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23116
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R11064
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.900

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