DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5921 and Pdzd2

DIOPT Version :9

Sequence 1:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster
Sequence 2:NP_001074533.1 Gene:Pdzd2 / 68070 MGIID:1922394 Length:2796 Species:Mus musculus


Alignment Length:941 Identity:209/941 - (22%)
Similarity:318/941 - (33%) Gaps:258/941 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LTNSASTDCSSSMQGSTTSSASSDVMTLTTTAASSWCAIPASSRLRVLRLVRPHQRRLLVGGPER 81
            |.:|..|.....:...:|.|.|      ||...|.|            ||:||....::....|:
Mouse   549 LLDSTGTSQEYHIVKKSTRSLS------TTHVESPW------------RLIRPSVISIIGLYKEK 595

  Fly    82 GSTYGFTVRGGRE--HG-TGFFVSHVEHGGEAHLKG-LRIGDQILRINGFRL-----DDAVHKEF 137
            |...||::.|||:  .| .|.||..:...|.|...| |:.||:||.:||..:     .:|:| .|
Mouse   596 GKGLGFSIAGGRDCVRGQMGIFVKTIFPNGSAAEDGRLKEGDEILDVNGIPIKGLTFQEAIH-TF 659

  Fly   138 IQLVAGQDRVTL--KVRGVGMLPVRDLPEERLSWSVVKLPSVSGTPSESSFKGERRGASRD---- 196
            .|:.:|...:|:  |:....:.|.          |.....|.|.:||.:|..|...|..:|    
Mouse   660 KQIRSGLFVLTVRTKLLSPSLTPC----------STPTHMSRSSSPSFNSSGGAPAGGGQDEGGS 714

  Fly   197 ---------------ISVVLHVAPRTKLGLGIC-----KGPEWKPGIFVQFTKDRSVAR-EAGLR 240
                           :.|.|:..||..||:|.|     ..|   |||::......|||: |:.|.
Mouse   715 ASLGRKAPGPKDRIVMEVTLNKEPRVGLGIGACCLALENSP---PGIYIHSLAPGSVAKMESNLS 776

  Fly   241 PGDQILSVNSIDFSDVLFSEAVAVMK-------------------SSSKLDMVVRTAAGCDLFPG 286
            .|||||.|||::......|:..|::.                   |..::|.|:..:.     ..
Mouse   777 RGDQILEVNSVNVRHAALSKVHAILSKCPPGPVRLVIGRHPNPKVSEQEMDEVIARST-----YQ 836

  Fly   287 ESSGYNSSASSVTGDQSPCWADAKS----KRLTAVREESGAGGGGCGLSSAPGAGSPNWSQGVEV 347
            ||...|||.|..|..:||..|...|    ..|:......|.|    .||....|||.:     |.
Mouse   837 ESKEANSSPSLGTPLKSPSLAKKDSLLSESELSQYFVHDGQG----SLSDFVVAGSED-----ED 892

  Fly   348 HKQMNKTIIKLTENGT--SINNTYIASTG----GSSVSGSGSTGSGTSGRS---QQSQSNPSNPS 403
            |....   .:.:|:|:  ::.:.| ..||    .|.|:.....|||...:.   .:..|.|.:|.
Mouse   893 HPGSG---YETSEDGSLLTVPSAY-RETGKARANSLVTLGSQRGSGLLHKQVTVARQASLPGSPQ 953

  Fly   404 --RNSTTMKRSHLRPVNSAGSGIGLSSGSAGSAGSAGSSGSGSRSGGVIAPAPAPPPPAMNEG-- 464
              ||....:|.    |....|..|.........|...|      ..||:   |.|..|.:.:.  
Mouse   954 VLRNPLLRQRR----VRCYDSNDGSDDEDFDGEGDCVS------LPGVL---PGPGRPLVQDDTR 1005

  Fly   465 ---ANASGSVGSSLSSAITEELKKRKEKQQQQQHQQRHNRDRDRDGNGNVDRQLTGHNGNGGHRS 526
               |.:|.|:          ::.|:.|:.|:....:.            ....|.|.:.:..|  
Mouse  1006 FALATSSKSI----------DVNKQDERLQKPLVSKA------------CSVPLLGSSLDSEH-- 1046

  Fly   527 SVGQVSHRQRANVAGVAATLQGS-ERISNLTGGGGAGGAGGSNGAA------------------G 572
            |:    |...|.....||:|.|| |...|..||.......||..:.                  |
Mouse  1047 SI----HGGTAGTPPKAASLPGSVETPKNGPGGSRRKEMSGSRSSPKLEYRVPADTQSPRSPENG 1107

  Fly   573 AGGDQHTALMDEFKRAHQRMFRNGFH----ESEHKLSSLGKSSLADRSLYGREMSLLRVKNGGSG 633
            ....|.|   :.....|:.:.|...|    ::|...|.......|..         |:|      
Mouse  1108 TSPPQKT---ENLVSRHKPVARISPHYKRSDAEEAPSETANGPCAQD---------LKV------ 1154

  Fly   634 GGEGSGVMPTMRPVSMGRPLVTMSTYQERGETLKRTSIMPDESCYRNSINSNNNNGFSRNRSNSN 698
              :.|.|..   ||:..:|..| :..:.||......|.:| .:|...|...:.|.|..       
Mouse  1155 --QASSVKD---PVAGHQPGGT-AEKELRGNPTPGDSSVP-TNCGPASTPCHPNTGLP------- 1205

  Fly   699 TNNNNRLQSQNGVNPANG-NGSPELPPPPPQFANPQPKQMPPQHIKPMTGNAAANGSGSANGLGN 762
            |.|......:.|.:|..| :||.:.||.|.:          .:.::|.:....|           
Mouse  1206 TENPQGAAPECGPHPGTGWDGSSDHPPSPGK----------SREVRPDSSETPA----------- 1249

  Fly   763 GSLAKVRQPMSPMRSASISVGGFRPPATPQPDYDAVQIRSSQGSESVSGRDVATSQQQRRTLRLG 827
             ...:|.||.|..:..|        |.|.:|:...|.........|:|.|:.|::.........|
Mouse  1250 -VTEQVLQPESLSQPVS--------PGTSEPESQGVSKMKPASQRSLSPREKASALPDSSRTWAG 1305

  Fly   828 TVTIGEYGDQRTTGKRETLRKTNGEPASNGI 858
            .      ||...:.:|..:..:.||..:..|
Mouse  1306 P------GDSTPSTRRAAVPMSIGETRATAI 1330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492 27/80 (34%)
PDZ_signaling 197..276 CDD:238492 30/103 (29%)
Pdzd2NP_001074533.1 PDZ_signaling 335..416 CDD:238492
PDZ_signaling 591..672 CDD:238492 27/81 (33%)
PDZ_signaling 729..813 CDD:238492 27/86 (31%)
PHA03307 1050..>1355 CDD:223039 69/349 (20%)
PHA03247 <1197..1562 CDD:223021 34/177 (19%)
PDZ_signaling 2581..2663 CDD:238492
PDZ 2709..2791 CDD:214570
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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