DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5921 and lnx2b

DIOPT Version :9

Sequence 1:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster
Sequence 2:NP_998105.2 Gene:lnx2b / 564464 ZFINID:ZDB-GENE-040426-2500 Length:678 Species:Danio rerio


Alignment Length:262 Identity:66/262 - (25%)
Similarity:107/262 - (40%) Gaps:57/262 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 ERGSTYGF-TVRGGREHGTGFFVSHVEHGGEAHLKG-LRIGDQILRINGFRLDDAVHKEFIQLVA 142
            ||....|. .:|...|  .|.|:..:..||.|...| ||..|::|.|||..|.....:...|::.
Zfish   334 ERSEALGIKLIRKSEE--PGVFILDLLPGGLAAKDGKLRNNDKVLGINGQDLRHGTPESAAQIIQ 396

  Fly   143 GQDRVTLKVRGVGMLPVRDLPEERLSWSVVKLPSVSGTPSESSFKGERR---------------- 191
            ..                   |.|:::.|::|..||....|...:|.||                
Zfish   397 AS-------------------EMRVNFVVMRLQDVSEEGGEGQSRGARRVPEPQYFRRHSEYMKE 442

  Fly   192 ----GASRDISVVLHVAPRTKLGLGICKGPEWKPGIFVQFTKDRSVA---REAGLRPGDQILSVN 249
                .:|::.:|.|...||..||:.|..|.:.:..:.|..|..:.|.   |:..::.||.:||:|
Zfish   443 PPGGFSSQEKTVTLKKEPRQSLGITIAGGRDCRSRLPVYITSVQPVGCLHRDGTVKTGDVLLSIN 507

  Fly   250 SIDFSDVLFSEAVAVMKS----SSKLDMVVRTAAGCDLFPGESSGYNSSASSVTGDQS------P 304
            .||.:.:.::|||.|:|:    |:....|::|.|..:...|| ||......::.|.:.      |
Zfish   508 GIDLTHLTYNEAVTVLKTQTAQSTVTLRVIQTFADDEEQDGE-SGSREDMDTMEGPKDDDINWVP 571

  Fly   305 CW 306
            .|
Zfish   572 LW 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492 18/71 (25%)
PDZ_signaling 197..276 CDD:238492 26/85 (31%)
lnx2bNP_998105.2 RING 46..82 CDD:214546
PDZ_signaling 210..291 CDD:238492
PDZ_signaling 325..406 CDD:238492 22/92 (24%)
PDZ_signaling 451..537 CDD:238492 25/85 (29%)
PDZ_signaling 587..671 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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