DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5921 and pdzd3a

DIOPT Version :9

Sequence 1:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster
Sequence 2:XP_685398.3 Gene:pdzd3a / 557269 ZFINID:ZDB-GENE-080430-1 Length:520 Species:Danio rerio


Alignment Length:443 Identity:97/443 - (21%)
Similarity:152/443 - (34%) Gaps:123/443 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 RLLVGGPERGSTYGFTVRGGREHGTGFFVSHVEHGGEAHLKGLRIGDQILRINGFRLDDAVHKEF 137
            ||.|...|.|..:||.:........|..|..||....|...||||||.:|.:|...:||..|   
Zfish    62 RLCVLRREEGQGFGFYLSRDAGRCRGHVVRQVEPWSSAERAGLRIGDHVLEVNEDFVDDKEH--- 123

  Fly   138 IQLVAGQDRVTLKVRGVGM------LPVRD----LPEERLSWSVVKLPSVSGTPSESSFKGERRG 192
                   ..|.|||:..|:      |..:|    :.|.|...||.:           |::.|  |
Zfish   124 -------STVVLKVQASGLKLYLLVLSAQDYEFAVSEGRDLLSVAR-----------SYRPE--G 168

  Fly   193 ASRDISVVLHVAPRTKLGLGICKGP-EWKPGIFVQFTKDRSVAREAGLRPGDQILSVNSIDFSDV 256
            .||  ..:.|:......|||:...| |...|.:.........|..||::.||:::.:|.:..|.:
Zfish   169 CSR--PRLCHITKEPGCGLGLSIIPIEGARGRYRLNPVTDGPAERAGIQNGDRLIWINGVSISVI 231

  Fly   257 LFSEAVAVMKSSSK-LDMVVRTAAGCDLFPGESSGYNSSASSVTGDQSPCWADA-------KSKR 313
            .::....::|...| |.::|..:...::       ||.....:.    |.:|:.       |:..
Zfish   232 SYAALAKMVKKCEKHLTVLVIDSRSEEI-------YNRMGLPII----PAFAETHNLPYRPKTLH 285

  Fly   314 LT--------AVREESGAGGGGCGLSSAPGAGSPNWSQGVEVHKQMNKTIIKLTENGTSINNTYI 370
            ||        .:|:|....|....:.......||..:.|:|..:      |.|..||..:.:   
Zfish   286 LTQGPQGYGFLLRQEKLRSGRIAHILREIDPCSPAETAGMEDGE------IVLAVNGEQVED--- 341

  Fly   371 ASTGG--SSVSGSGS----TGSGTSGRSQQSQ------------------------------SNP 399
            |...|  |.:..||.    |....:||...:|                              .||
Zfish   342 AEHEGIVSKIRQSGQQVTLTTISIAGRDFYTQLAMSPLLFYDEHIPKCEPFATPALEHPEGHQNP 406

  Fly   400 SNPSRNSTTMKRSHLRPVNSAGSGIGLSSGSAGS-----AGSAGSSGSGSRSG 447
            ..|          .|..::..|:|.|.:.|...:     .|...|..:|.|:|
Zfish   407 PQP----------RLCELHKEGTGFGFNLGCVENKPGTYIGQVVSGSTGERAG 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492 22/69 (32%)
PDZ_signaling 197..276 CDD:238492 17/80 (21%)
pdzd3aXP_685398.3 PDZ_signaling 61..142 CDD:238492 28/89 (31%)
PDZ_signaling 172..252 CDD:238492 17/79 (22%)
PDZ 280..363 CDD:214570 20/91 (22%)
PDZ 408..490 CDD:214570 11/52 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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