DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5921 and slc9a3r1a

DIOPT Version :9

Sequence 1:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster
Sequence 2:NP_997872.2 Gene:slc9a3r1a / 327272 ZFINID:ZDB-GENE-031006-7 Length:384 Species:Danio rerio


Alignment Length:474 Identity:106/474 - (22%)
Similarity:161/474 - (33%) Gaps:171/474 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 ERGST-YGFTVRGGREHGTGFFVSHVEHGGEAHLKGLRIGDQILRINGFRLDDAVHKEFI----Q 139
            |:|.| |||.:. |.::..|.|:.|||....|...||..||::..:||..::|..|::.:    .
Zfish    13 EKGDTGYGFHLH-GEKNKPGQFIRHVEPDSPAAAAGLLAGDKLALVNGENVEDEKHQQVVSRIRD 76

  Fly   140 LVAGQDRVTLKVRGVGML------------------PVRDLPEERLSWSVVKLPSVSGTPS-ESS 185
            .|...:.|.|......:|                  |....||:.:.         :||.| ||:
Zfish    77 TVGKLELVVLNAETAELLLKHNLKCQKEYVTDGIPIPAGSEPEDEVK---------NGTSSREST 132

  Fly   186 FKGERRGASR-DISVVLHVAPRTKLGLGIC---KG----------PEWKPGIFVQFTKDRSVARE 236
            ...|..|..| |...|.....:.:|...:|   ||          .:.|||.:::...:.|.|.:
Zfish   133 PVPETNGDMRIDRLSVSSKDSKNELRPRLCHIKKGATGYGFNLHTEKTKPGQYIRAVDEDSPAEK 197

  Fly   237 AGLRPGDQILSVNSIDFSDVLFSEAVAVMKS---SSKLDMVVRTAA-----GCDLFPGESSGYNS 293
            :||||.|:|:.||.|....:..||.||.:|:   .:|| :||...|     .|::.|.|      
Zfish   198 SGLRPQDKIVQVNGISVHTMQHSEVVAAIKAGGDETKL-LVVDPEADAFFMSCEILPTE------ 255

  Fly   294 SASSVTGDQSPCWADAKSKRLTAVREESGAGGGGCGLSSAPGAGSPNWSQGVEVHKQMNKTIIKL 358
                              :.||....|           ..|...:.....|..|.::..|..:.|
Zfish   256 ------------------EHLTGPLPE-----------PIPRREAEEQVNGKVVQEEKPKVEMSL 291

  Fly   359 TENGTSINNTYIASTGGSSVSGSGSTGSGTSGRSQQSQSNPSNPSRNSTTMKRSHLRPVNSAGSG 423
            :.:.||.|.                                                        
Zfish   292 SSSSTSSNT-------------------------------------------------------- 300

  Fly   424 IGLSSGSAGSAGSAGSSGSGSRSGGVIAPAPA-PPPPAMNEGANASGSVGSSLSS-----AITEE 482
               |:.:|.:..||.:..|        ||||| .|.|||  .|.....|....||     |:...
Zfish   301 ---STSAAPAPASAPAPAS--------APAPASAPAPAM--AAAPQEKVKEKASSADAGLALNMS 352

  Fly   483 LKKRKEKQQQQQHQQRHNR 501
            |::.||:    .||:|.|:
Zfish   353 LQQAKER----AHQKRSNK 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492 23/74 (31%)
PDZ_signaling 197..276 CDD:238492 27/94 (29%)
slc9a3r1aNP_997872.2 PDZ_signaling 7..86 CDD:238492 23/73 (32%)
PDZ_signaling 159..238 CDD:238492 24/79 (30%)
EBP50_C 242..384 CDD:312529 41/234 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.