DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5921 and Cytip

DIOPT Version :9

Sequence 1:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster
Sequence 2:NP_001012086.1 Gene:Cytip / 311047 RGDID:1307990 Length:359 Species:Rattus norvegicus


Alignment Length:363 Identity:73/363 - (20%)
Similarity:122/363 - (33%) Gaps:88/363 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 STSASLTNSASTDCSS--SMQGSTTSSASSDVMTLTTTAASSWCAIPASSRLRVLRLVRP----- 69
            |::.:|...|.:..||  ::.|..|...:..:..|..|.|:    :|...  :.|.|.|.     
  Rat    11 SSNGNLEYCADSAYSSYPTLTGPLTVEDNRRIQMLADTVAT----LPRGR--KQLALARSSSLGD 69

  Fly    70 ---HQRRLLVGGPERGSTYGFTVRGGREHGTGF-------FVSHVEHGGEAHLKGLRIGDQILRI 124
               .||:::....:...|:||.::..|......       .:..|:....||..||::||....:
  Rat    70 FSCSQRKVVTVEKQDNGTFGFEIQTYRLQNQNICSSEVCTMICKVQEDSPAHCAGLQVGDIFANV 134

  Fly   125 NGFRLDDAVHKEFIQLVAGQDRV--------------------------TLKVRGVGMLPVRDLP 163
            ||...:...||:.:.|:.....:                          |||.:.|.:..:. |.
  Rat   135 NGVSTEGFTHKQVVDLIRSSGNLLTIETLNGTMIHRRAELEAKLQTLKQTLKKKWVELRSLH-LQ 198

  Fly   164 EER-LSWSVVKLPSVSG-TPSESSFKGERRGASRDISVVLHVAPRTKLGLGICKGPEWKPGIFVQ 226
            |:| |.......|::.. ...|||..|...|.|                          |...  
  Rat   199 EQRLLHGDAANSPNLENMNLDESSLFGNLLGPS--------------------------PAFL-- 235

  Fly   227 FTKDR-SVAREAGLRPGDQILSVNSIDFSDVLFSE---AVAVMKSSSKLDMVVRTAAGCDLFPGE 287
               || .::.|:..:.....|:|:|.|......||   ..|..:.:|..|....:..|.::....
  Rat   236 ---DRPRLSSESSCKSWLSSLTVDSEDDYGTSVSEDSIRGAFSRQTSTDDECFHSKDGDEILRNA 297

  Fly   288 SSGYNSSAS-SVTGDQSPCWADAKSKRLTAVREESGAG 324
            ||..|.|.| :.:|..||.|....|.....:..:|..|
  Rat   298 SSRRNRSISITSSGSFSPLWESNYSSVFGTLPRKSRRG 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492 19/102 (19%)
PDZ_signaling 197..276 CDD:238492 13/82 (16%)
CytipNP_001012086.1 PDZ_signaling 76..161 CDD:238492 16/84 (19%)
Interaction with CYTH1. /evidence=ECO:0000250 166..188 3/21 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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